RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 FAM126AQ9BYI3 521 aaPredicted RBP8.55□□□□□ -1.04
VPS45-210ENST00000497638 ZNF302Q9NR11 478 aa8.55□□□□□ -1.04
VPS45-210ENST00000497638 MRPL17Q9NRX2 175 aaKnown RBP8.55□□□□□ -1.04
VPS45-210ENST00000497638 RCAN3Q9UKA8 241 aa8.55□□□□□ -1.04
VPS45-210ENST00000497638 ANGPTL2Q9UKU9 493 aa8.55□□□□□ -1.04
VPS45-210ENST00000497638 MYH9P35579 1960 aaKnown RBP8.55□□□□□ -1.04
VPS45-210ENST00000497638 CCDC195A0A1B0GUA6 201 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 INPPL1O15357 1258 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 MAGEB2O15479 319 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 LRP3O75074 770 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 LRRN2O75325 713 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 GLUD1P00367 558 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 LAMP2P13473 410 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 TMOD1P28289 359 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 KIF5BP33176 963 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 ST13P50502 369 aaKnown RBP8.54□□□□□ -1.04
VPS45-210ENST00000497638 NLRP11P59045 1033 aaKnown RBP8.54□□□□□ -1.04
VPS45-210ENST00000497638 DAB2P98082 770 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 RNASELQ05823 741 aaKnown RBP8.54□□□□□ -1.04
VPS45-210ENST00000497638 ITGB3BPQ13352 177 aaPredicted RBP8.54□□□□□ -1.04
VPS45-210ENST00000497638 GAB4Q2WGN9 574 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 ANKRD45Q5TZF3 282 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 MIS18BP1Q6P0N0 1132 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 ABHD15Q6UXT9 468 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 RSPO2Q6UXX9 243 aaPredicted RBP8.54□□□□□ -1.04
VPS45-210ENST00000497638 BNC2Q6ZN30 1099 aaPredicted RBP8.54□□□□□ -1.04
VPS45-210ENST00000497638 TSPYL5Q86VY4 417 aaPredicted RBP8.54□□□□□ -1.04
VPS45-210ENST00000497638 CCDC60Q8IWA6 550 aaPredicted RBP8.54□□□□□ -1.04
VPS45-210ENST00000497638 TEX2Q8IWB9 1127 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 OXR1Q8N573 874 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 PDZD8Q8NEN9 1154 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 CTCFLQ8NI51 663 aaPredicted RBP8.54□□□□□ -1.04
VPS45-210ENST00000497638 HDAC7Q8WUI4 952 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 DDX1Q92499 740 aaKnown RBP8.54□□□□□ -1.04
VPS45-210ENST00000497638 SMG7Q92540 1137 aaKnown RBP8.54□□□□□ -1.04
VPS45-210ENST00000497638 RILPL2Q969X0 211 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 MAP3K14Q99558 947 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 LZTS2Q9BRK4 669 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 VN1R3Q9BXE9 311 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 NRDE2Q9H7Z3 1164 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 AGO4Q9HCK5 861 aaKnown RBP8.54□□□□□ -1.04
VPS45-210ENST00000497638 PARD6AQ9NPB6 346 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 DIAPH3Q9NSV4 1193 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 TBC1D13Q9NVG8 400 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 RAB23Q9ULC3 237 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 PCDHA6Q9UN73 950 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 AKT3Q9Y243 479 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 SSX2IPQ9Y2D8 614 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 PCDHA8Q9Y5H6 950 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 ZFP37Q9Y6Q3 630 aaPredicted RBP8.54□□□□□ -1.04
VPS45-210ENST00000497638 NUMBLQ9Y6R0 609 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 F5P12259 2224 aa8.54□□□□□ -1.04
VPS45-210ENST00000497638 MYH15Q9Y2K3 1946 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 HIP1O00291 1037 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 ETV2O00321 342 aaPredicted RBP8.53□□□□□ -1.04
VPS45-210ENST00000497638 FOXD2O60548 495 aaPredicted RBP8.53□□□□□ -1.04
VPS45-210ENST00000497638 CCNE2O96020 404 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 C1RP00736 705 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 URODP06132 367 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 DARSP14868 501 aaKnown RBP8.53□□□□□ -1.04
VPS45-210ENST00000497638 SLC11A1P49279 550 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 RAB27AP51159 221 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 CLCN3P51790 818 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 SHC2P98077 582 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 UBXN2BQ14CS0 331 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 MLF2Q15773 248 aaPredicted RBP8.53□□□□□ -1.04
VPS45-210ENST00000497638 UBE2SQ16763 222 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 CEP55Q53EZ4 464 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 NOMO2Q5JPE7 1267 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 LAIR1Q6GTX8 287 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 CWC27Q6UX04 472 aaKnown RBP8.53□□□□□ -1.04
VPS45-210ENST00000497638 GET4Q7L5D6 327 aaPredicted RBP8.53□□□□□ -1.04
VPS45-210ENST00000497638 CKAP2LQ8IYA6 745 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 LINC01465Q8N7H1 131 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 ZNF707Q96C28 371 aaPredicted RBP8.53□□□□□ -1.04
VPS45-210ENST00000497638 SCLT1Q96NL6 688 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 RNF32Q9H0A6 362 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 PRMT8Q9NR22 394 aaPredicted RBP8.53□□□□□ -1.04
VPS45-210ENST00000497638 CHST12Q9NRB3 414 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 RALYQ9UKM9 306 aaKnown RBP8.53□□□□□ -1.04
VPS45-210ENST00000497638 IGF2RP11717 2491 aa8.53□□□□□ -1.04
VPS45-210ENST00000497638 FRYQ5TBA9 3013 aa8.52□□□□□ -1.05
VPS45-210ENST00000497638 NCAM2O15394 837 aa8.52□□□□□ -1.05
VPS45-210ENST00000497638 CILPO75339 1184 aa8.52□□□□□ -1.05
VPS45-210ENST00000497638 RFPL2O75678 378 aa8.52□□□□□ -1.05
VPS45-210ENST00000497638 DDAH1O94760 285 aa8.52□□□□□ -1.05
VPS45-210ENST00000497638 SOD2P04179 222 aa8.52□□□□□ -1.05
VPS45-210ENST00000497638 SSBP05455 408 aaKnown RBP eCLIP8.52□□□□□ -1.05
VPS45-210ENST00000497638 PMLP29590 882 aa8.52□□□□□ -1.05
VPS45-210ENST00000497638 RPS9P46781 194 aaKnown RBP8.52□□□□□ -1.05
VPS45-210ENST00000497638 GNAQP50148 359 aa8.52□□□□□ -1.05
VPS45-210ENST00000497638 GPC3P51654 580 aa8.52□□□□□ -1.05
VPS45-210ENST00000497638 PFKPQ01813 784 aa8.52□□□□□ -1.05
VPS45-210ENST00000497638 CAMK2GQ13555 558 aaPredicted RBP8.52□□□□□ -1.05
VPS45-210ENST00000497638 TMEM201Q5SNT2 666 aa8.52□□□□□ -1.05
VPS45-210ENST00000497638 ZBTB41Q5SVQ8 909 aa8.52□□□□□ -1.05
VPS45-210ENST00000497638 SWSAP1Q6NVH7 229 aa8.52□□□□□ -1.05
VPS45-210ENST00000497638 NIPA1Q7RTP0 329 aa8.52□□□□□ -1.05
VPS45-210ENST00000497638 RALYLQ86SE5 291 aaKnown RBP8.52□□□□□ -1.05
VPS45-210ENST00000497638 RNF141Q8WVD5 230 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms