RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 TYRP14679 529 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 KELP23276 732 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 CCND1P24385 295 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 CERS1P27544 350 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 RECQLP46063 649 aaPredicted RBP4.49□□□□□ -1.69
CBX3-208ENST00000497498 ALDH9A1P49189 494 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 ZNF134P52741 427 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 FAM50AQ14320 339 aaKnown RBP4.49□□□□□ -1.69
CBX3-208ENST00000497498 EMC10Q5UCC4 262 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 ICE2Q659A1 982 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 SFRP4Q6FHJ7 346 aaPredicted RBP4.49□□□□□ -1.69
CBX3-208ENST00000497498 TMEM108Q6UXF1 575 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 USP45Q70EL2 814 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 SLC29A4Q7RTT9 530 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 MAVSQ7Z434 540 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 WDR53Q7Z5U6 358 aaPredicted RBP4.49□□□□□ -1.69
CBX3-208ENST00000497498 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.49□□□□□ -1.69
CBX3-208ENST00000497498 ZNF366Q8N895 744 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 ASPSCR1Q9BZE9 553 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 DLL3Q9NYJ7 618 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 SH2B3Q9UQQ2 575 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 H0YIZ8 118 aa4.48□□□□□ -1.69
CBX3-208ENST00000497498 M0QYG6 137 aa4.48□□□□□ -1.69
CBX3-208ENST00000497498 MYO1FO00160 1098 aa4.48□□□□□ -1.69
CBX3-208ENST00000497498 SLC16A3O15427 465 aaKnown RBP4.48□□□□□ -1.69
CBX3-208ENST00000497498 TLR5O60602 858 aa4.48□□□□□ -1.69
CBX3-208ENST00000497498 ONECUT2O95948 504 aa4.48□□□□□ -1.69
CBX3-208ENST00000497498 IL6RP08887 468 aaPredicted RBP4.48□□□□□ -1.69
CBX3-208ENST00000497498 POU2F2P09086 479 aa4.48□□□□□ -1.69
CBX3-208ENST00000497498 LIPAP38571 399 aa4.48□□□□□ -1.69
CBX3-208ENST00000497498 MAP2K6P52564 334 aa4.48□□□□□ -1.69
CBX3-208ENST00000497498 TUBA4AP68366 448 aa4.48□□□□□ -1.69
CBX3-208ENST00000497498 MAPK7Q13164 816 aa4.48□□□□□ -1.69
CBX3-208ENST00000497498 MORN5Q5VZ52 161 aa4.48□□□□□ -1.69
CBX3-208ENST00000497498 BHLHA9Q7RTU4 235 aa4.48□□□□□ -1.69
CBX3-208ENST00000497498 ZNF804AQ7Z570 1209 aa4.48□□□□□ -1.69
CBX3-208ENST00000497498 CPA6Q8N4T0 437 aa4.48□□□□□ -1.69
CBX3-208ENST00000497498 LMBRD1Q9NUN5 540 aa4.48□□□□□ -1.69
CBX3-208ENST00000497498 CADPSQ9ULU8 1353 aa4.48□□□□□ -1.69
CBX3-208ENST00000497498 DCLK1O15075 740 aa4.47□□□□□ -1.69
CBX3-208ENST00000497498 DNAJB5O75953 348 aa4.47□□□□□ -1.69
CBX3-208ENST00000497498 AHSGP02765 367 aa4.47□□□□□ -1.69
CBX3-208ENST00000497498 FTLP02792 175 aaPredicted RBP4.47□□□□□ -1.69
CBX3-208ENST00000497498 EPHB2P29323 1055 aa4.47□□□□□ -1.69
CBX3-208ENST00000497498 PPIFP30405 207 aaKnown RBP4.47□□□□□ -1.69
CBX3-208ENST00000497498 CYP2C18P33260 490 aa4.47□□□□□ -1.69
CBX3-208ENST00000497498 EEFSECP57772 596 aaKnown RBP4.47□□□□□ -1.69
CBX3-208ENST00000497498 EVA1CP58658 441 aa4.47□□□□□ -1.69
CBX3-208ENST00000497498 KLF9Q13886 244 aaPredicted RBP4.47□□□□□ -1.69
CBX3-208ENST00000497498 TMEM240Q5SV17 173 aa4.47□□□□□ -1.69
CBX3-208ENST00000497498 YTHDF3Q7Z739 585 aaKnown RBP4.47□□□□□ -1.69
CBX3-208ENST00000497498 FANCBQ8NB91 859 aa4.47□□□□□ -1.69
CBX3-208ENST00000497498 FAM46DQ8NEK8 389 aa4.47□□□□□ -1.69
CBX3-208ENST00000497498 RPL36ALQ969Q0 106 aaKnown RBP4.47□□□□□ -1.69
CBX3-208ENST00000497498 SLC46A1Q96NT5 459 aa4.47□□□□□ -1.69
CBX3-208ENST00000497498 BHMT2Q9H2M3 363 aa4.47□□□□□ -1.69
CBX3-208ENST00000497498 PNPOQ9NVS9 261 aa4.47□□□□□ -1.69
CBX3-208ENST00000497498 SH3BP4Q9P0V3 963 aa4.47□□□□□ -1.69
CBX3-208ENST00000497498 HESX1Q9UBX0 185 aa4.47□□□□□ -1.69
CBX3-208ENST00000497498 SSX2IPQ9Y2D8 614 aa4.47□□□□□ -1.69
CBX3-208ENST00000497498 FNDC1Q4ZHG4 1894 aaPredicted RBP4.47□□□□□ -1.69
CBX3-208ENST00000497498 PRRT4C9JH25 899 aa4.46□□□□□ -1.7
CBX3-208ENST00000497498 QSOX1O00391 747 aa4.46□□□□□ -1.7
CBX3-208ENST00000497498 PPP6CO00743 305 aa4.46□□□□□ -1.7
CBX3-208ENST00000497498 ADAMTS3O15072 1205 aa4.46□□□□□ -1.7
CBX3-208ENST00000497498 ATXN1LP0C7T5 689 aaKnown RBP4.46□□□□□ -1.7
CBX3-208ENST00000497498 PTGER1P34995 402 aa4.46□□□□□ -1.7
CBX3-208ENST00000497498 LOXL3P58215 753 aa4.46□□□□□ -1.7
CBX3-208ENST00000497498 NKX6-1P78426 367 aaPredicted RBP4.46□□□□□ -1.7
CBX3-208ENST00000497498 LONRF3Q496Y0 759 aa4.46□□□□□ -1.7
CBX3-208ENST00000497498 CEP78Q5JTW2 689 aa4.46□□□□□ -1.7
CBX3-208ENST00000497498 TREML2Q5T2D2 321 aa4.46□□□□□ -1.7
CBX3-208ENST00000497498 PRAMEF17Q5VTA0 474 aa4.46□□□□□ -1.7
CBX3-208ENST00000497498 PTDSS2Q9BVG9 487 aa4.46□□□□□ -1.7
CBX3-208ENST00000497498 NRIP3Q9NQ35 241 aa4.46□□□□□ -1.7
CBX3-208ENST00000497498 DUSP22Q9NRW4 184 aa4.46□□□□□ -1.7
CBX3-208ENST00000497498 PCDHA1Q9Y5I3 950 aa4.46□□□□□ -1.7
CBX3-208ENST00000497498 MOSPD3O75425 235 aa4.45□□□□□ -1.7
CBX3-208ENST00000497498 SNUPNO95149 360 aaKnown RBP4.45□□□□□ -1.7
CBX3-208ENST00000497498 TUBB4AP04350 444 aa4.45□□□□□ -1.7
CBX3-208ENST00000497498 CTGFP29279 349 aa4.45□□□□□ -1.7
CBX3-208ENST00000497498 MPGP29372 298 aa4.45□□□□□ -1.7
CBX3-208ENST00000497498 PXNP49023 591 aaPredicted RBP4.45□□□□□ -1.7
CBX3-208ENST00000497498 KRTAP10-9P60411 292 aa4.45□□□□□ -1.7
CBX3-208ENST00000497498 SP2Q02086 613 aa4.45□□□□□ -1.7
CBX3-208ENST00000497498 EXOSC9Q06265 439 aaKnown RBP4.45□□□□□ -1.7
CBX3-208ENST00000497498 PLS1Q14651 629 aa4.45□□□□□ -1.7
CBX3-208ENST00000497498 IQCB1Q15051 598 aa4.45□□□□□ -1.7
CBX3-208ENST00000497498 ETFDHQ16134 617 aa4.45□□□□□ -1.7
CBX3-208ENST00000497498 PGS1Q32NB8 556 aa4.45□□□□□ -1.7
CBX3-208ENST00000497498 SLC18B1Q6NT16 456 aa4.45□□□□□ -1.7
CBX3-208ENST00000497498 RP9Q8TA86 221 aaKnown RBP4.45□□□□□ -1.7
CBX3-208ENST00000497498 FCRL4Q96PJ5 515 aa4.45□□□□□ -1.7
CBX3-208ENST00000497498 FSD1LQ9BXM9 530 aa4.45□□□□□ -1.7
CBX3-208ENST00000497498 QTRT1Q9BXR0 403 aaKnown RBP4.45□□□□□ -1.7
CBX3-208ENST00000497498 SERTAD3Q9UJW9 196 aa4.45□□□□□ -1.7
CBX3-208ENST00000497498 CACNA1IQ9P0X4 2223 aa4.44□□□□□ -1.7
CBX3-208ENST00000497498 SMIM22K7EJ46 135 aa4.44□□□□□ -1.7
CBX3-208ENST00000497498 ERC2O15083 957 aa4.44□□□□□ -1.7
CBX3-208ENST00000497498 KCNAB3O43448 404 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms