RNA–Protein interactions for RNA: ENST00000497232.5

CCDC142-209, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-209ENST00000497232 POF1BQ8WVV4 589 aa11.64□□□□□ -0.55
CCDC142-209ENST00000497232 TIFAQ96CG3 184 aa11.64□□□□□ -0.55
CCDC142-209ENST00000497232 SPAG5Q96R06 1193 aa11.64□□□□□ -0.55
CCDC142-209ENST00000497232 CHP1Q99653 195 aa11.64□□□□□ -0.55
CCDC142-209ENST00000497232 NT5C1AQ9BXI3 368 aa11.64□□□□□ -0.55
CCDC142-209ENST00000497232 NUCKS1Q9H1E3 243 aaKnown RBP11.64□□□□□ -0.55
CCDC142-209ENST00000497232 FNIP2Q9P278 1114 aa11.64□□□□□ -0.55
CCDC142-209ENST00000497232 MSRAQ9UJ68 235 aa11.64□□□□□ -0.55
CCDC142-209ENST00000497232 CDH9Q9ULB4 789 aa11.64□□□□□ -0.55
CCDC142-209ENST00000497232 COL4A4P53420 1690 aaPredicted RBP11.63□□□□□ -0.55
CCDC142-209ENST00000497232 C2orf71A6NGG8 1288 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 OR6C75A6NL08 312 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 GABBR2O75899 941 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 ABLIM3O94929 683 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 FERP16591 822 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 CDH5P33151 784 aaPredicted RBP11.63□□□□□ -0.55
CCDC142-209ENST00000497232 GLUD2P49448 558 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 PSMC1P62191 440 aaKnown RBP11.63□□□□□ -0.55
CCDC142-209ENST00000497232 FMO1Q01740 532 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 KRT17Q04695 432 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 CNGA2Q16280 664 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 ZNF394Q53GI3 561 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 PPP1R26Q5T8A7 1209 aaPredicted RBP11.63□□□□□ -0.55
CCDC142-209ENST00000497232 LILRA6Q6PI73 481 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 LCLAT1Q6UWP7 414 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 CEP57Q86XR8 500 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 PALB2Q86YC2 1186 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 FUKQ8N0W3 1084 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 MRPL43Q8N983 215 aaKnown RBP11.63□□□□□ -0.55
CCDC142-209ENST00000497232 B3GALNT2Q8NCR0 500 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 MYCBPAPQ8TBZ2 947 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 ZNF606Q8WXB4 792 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 AUTS2Q8WXX7 1259 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 RIN2Q8WYP3 895 aaPredicted RBP11.63□□□□□ -0.55
CCDC142-209ENST00000497232 PCDHB18PQ96TA0 734 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 SYT15Q9BQS2 421 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 C11orf84Q9BUA3 381 aaPredicted RBP11.63□□□□□ -0.55
CCDC142-209ENST00000497232 B3GNT5Q9BYG0 378 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 TTYH1Q9H313 450 aaPredicted RBP11.63□□□□□ -0.55
CCDC142-209ENST00000497232 SNX25Q9H3E2 840 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 KIAA1257Q9ULG3 409 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 PCDHGC3Q9UN70 934 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 PCDHGC5Q9Y5F6 944 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 SZT2Q5T011 3432 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 REV3LO60673 3130 aa11.63□□□□□ -0.55
CCDC142-209ENST00000497232 SSU72P8A0A1W2PR75 194 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 C19orf67A6NJJ6 358 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 HIDE1A8MVS5 230 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 DDX3XO00571 662 aaKnown RBP eCLIP11.62□□□□□ -0.55
CCDC142-209ENST00000497232 TEX28O15482 410 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 CYP1A1P04798 512 aaPredicted RBP11.62□□□□□ -0.55
CCDC142-209ENST00000497232 CNPP09543 421 aaKnown RBP11.62□□□□□ -0.55
CCDC142-209ENST00000497232 OR4Q2P0C623 313 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 VDRP11473 427 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 SKILP12757 684 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 KRT5P13647 590 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 RPL17P18621 184 aaKnown RBP11.62□□□□□ -0.55
CCDC142-209ENST00000497232 BRD2P25440 801 aaKnown RBP11.62□□□□□ -0.55
CCDC142-209ENST00000497232 PCSK1P29120 753 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 RPL34P49207 117 aaKnown RBP11.62□□□□□ -0.55
CCDC142-209ENST00000497232 CACNA2D1P54289 1103 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 GSDMDP57764 484 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 CCZ1BP86790 482 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 CCZ1P86791 482 aaPredicted RBP11.62□□□□□ -0.55
CCDC142-209ENST00000497232 CCDC173Q0VFZ6 552 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 GPR17Q13304 367 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 GPM6BQ13491 265 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 RAB33AQ14088 237 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 PSMD5Q16401 504 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 CTXN3Q4LDR2 81 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 PPP2R2DQ66LE6 453 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 ZNF280DQ6N043 979 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 TTC30AQ86WT1 665 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 METTL23Q86XA0 190 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 LRRC8AQ8IWT6 810 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 FBXO22Q8NEZ5 403 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 ZMIZ2Q8NF64 920 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 ZNF397Q8NF99 534 aaPredicted RBP11.62□□□□□ -0.55
CCDC142-209ENST00000497232 PCED1BQ96HM7 432 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 HNRNPABQ99729 332 aaKnown RBP11.62□□□□□ -0.55
CCDC142-209ENST00000497232 OXCT2Q9BYC2 517 aaPredicted RBP11.62□□□□□ -0.55
CCDC142-209ENST00000497232 CRISPLD1Q9H336 500 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 KCNF1Q9H3M0 494 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 HAUS4Q9H6D7 363 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 SLC28A3Q9HAS3 691 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 CSNK1G1Q9HCP0 422 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 CYTH4Q9UIA0 394 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 GTF3C4Q9UKN8 822 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 MTUS1Q9ULD2 1270 aa11.62□□□□□ -0.55
CCDC142-209ENST00000497232 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.62□□□□□ -0.55
CCDC142-209ENST00000497232 TMEM265A0A087WTH1 108 aa11.61□□□□□ -0.55
CCDC142-209ENST00000497232 WDR27A2RRH5 827 aa11.61□□□□□ -0.55
CCDC142-209ENST00000497232 H7C4K7 107 aa11.61□□□□□ -0.55
CCDC142-209ENST00000497232 RFXAPO00287 272 aa11.61□□□□□ -0.55
CCDC142-209ENST00000497232 CLDN5O00501 218 aa11.61□□□□□ -0.55
CCDC142-209ENST00000497232 ZNF263O14978 683 aa11.61□□□□□ -0.55
CCDC142-209ENST00000497232 LCA5LO95447 670 aa11.61□□□□□ -0.55
CCDC142-209ENST00000497232 SERPING1P05155 500 aa11.61□□□□□ -0.55
CCDC142-209ENST00000497232 MMEP08473 750 aa11.61□□□□□ -0.55
CCDC142-209ENST00000497232 CCDC130P13994 396 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms