RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 KCNMB3Q9NPA1 279 aa6.33□□□□□ -1.4
CACNA1C-229ENST00000496818 SLC2A4RGQ9NR83 387 aa6.33□□□□□ -1.4
CACNA1C-229ENST00000496818 ADAM28Q9UKQ2 775 aa6.33□□□□□ -1.4
CACNA1C-229ENST00000496818 VAV3Q9UKW4 847 aa6.33□□□□□ -1.4
CACNA1C-229ENST00000496818 NOL7Q9UMY1 257 aaKnown RBP6.33□□□□□ -1.4
CACNA1C-229ENST00000496818 LIMCH1Q9UPQ0 1083 aa6.33□□□□□ -1.4
CACNA1C-229ENST00000496818 GIT1Q9Y2X7 761 aa6.33□□□□□ -1.4
CACNA1C-229ENST00000496818 SIT1Q9Y3P8 196 aa6.33□□□□□ -1.4
CACNA1C-229ENST00000496818 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.33□□□□□ -1.4
CACNA1C-229ENST00000496818 NUMBLQ9Y6R0 609 aa6.33□□□□□ -1.4
CACNA1C-229ENST00000496818 FNDC1Q4ZHG4 1894 aaPredicted RBP6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 STK36Q9NRP7 1315 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 KRBA1A5PL33 1030 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 GREM1O60565 184 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 N4BP1O75113 896 aaKnown RBP6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 TADA2AO75478 443 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 STBD1O95210 358 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 DLGAP3O95886 979 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 C8AP07357 584 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 DCNP07585 359 aaKnown RBP6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 MYBP10242 640 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 LAMP2P13473 410 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 HOXA9P31269 272 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 HOXA11P31270 313 aaPredicted RBP6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 MAGEA9P43362 315 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 EVCP57679 992 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 PTENP60484 403 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 ARID5AQ03989 594 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 ZNF252P-AS1Q0IIN9 211 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 HTR4Q13639 388 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 PUM1Q14671 1186 aaKnown RBP eCLIP6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 EPHA7Q15375 998 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 PPM1LQ5SGD2 360 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 UBXN11Q5T124 520 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 TAF3Q5VWG9 929 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 SLC27A1Q6PCB7 646 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 PIK3AP1Q6ZUJ8 805 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 RUFY3Q7L099 469 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 PALB2Q86YC2 1186 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 C1orf210Q8IVY1 113 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 ZBTB8OSQ8IWT0 167 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 KIAA2013Q8IYS2 634 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 SLC44A3Q8N4M1 653 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 SMG8Q8ND04 991 aaKnown RBP6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 WASF1Q92558 559 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 NKD1Q969G9 470 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 CPB2Q96IY4 423 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 ZSCAN31Q96LW9 406 aaPredicted RBP6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 MYADMQ96S97 322 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 ADPGKQ9BRR6 497 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 EIF2AQ9BY44 585 aaKnown RBP6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 NFKBIZQ9BYH8 718 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 NT5C3AQ9H0P0 336 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 MINDY3Q9H8M7 445 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 RXFP1Q9HBX9 757 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 SPATA6Q9NWH7 488 aaPredicted RBP6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 FNIP2Q9P278 1114 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 NCDNQ9UBB6 729 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 CCDC39Q9UFE4 941 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 FBXW11Q9UKB1 542 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 CDH7Q9ULB5 785 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 EFR3BQ9Y2G0 817 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 HES2Q9Y543 173 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 CYP46A1Q9Y6A2 500 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 R4GN57 208 aa6.32□□□□□ -1.4
CACNA1C-229ENST00000496818 LOXHD1Q8IVV2 1947 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 CASTOR2A6NHX0 329 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 LRRIQ4A6NIV6 560 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 ANHXE9PGG2 379 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 TM4SF5O14894 197 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 N4BP3O15049 544 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 LAMTOR5O43504 91 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 NEMFO60524 1076 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 USO1O60763 962 aaKnown RBP6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 NPTXRO95502 500 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 TPM3P06753 285 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 HNRNPA1P09651 372 aaKnown RBP eCLIP6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 SP9P0CG40 484 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 ZSCAN22P10073 491 aaPredicted RBP6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 ARF4P18085 180 aaPredicted RBP6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 SDHBP21912 280 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 AKAP5P24588 427 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 KRT2P35908 639 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 RAC1P63000 192 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 PRKCQQ04759 706 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 MBTD1Q05BQ5 628 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 POU5F1BQ06416 359 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 STK3Q13188 491 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 TUSC3Q13454 348 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 CAPSQ13938 189 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 TOB2Q14106 344 aaPredicted RBP6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 CTTNQ14247 550 aaKnown RBP6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 PPP2R5DQ14738 602 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 UBXN2BQ14CS0 331 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 MLF2Q15773 248 aaPredicted RBP6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 PSMD5Q16401 504 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 DUOXA2Q1HG44 320 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 APBB1IPQ7Z5R6 666 aaPredicted RBP6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 CEP57Q86XR8 500 aa6.31□□□□□ -1.4
CACNA1C-229ENST00000496818 TPH2Q8IWU9 490 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms