RNA–Protein interactions for RNA: ENST00000496627.5

GCOM1-212, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 2,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-212ENST00000496627 SPARCL1Q14515 664 aa15.5■□□□□ 0.07
GCOM1-212ENST00000496627 MXD4Q14582 209 aaPredicted RBP15.5■□□□□ 0.07
GCOM1-212ENST00000496627 E2F5Q15329 346 aa15.5■□□□□ 0.07
GCOM1-212ENST00000496627 SMTNL2Q2TAL5 461 aa15.5■□□□□ 0.07
GCOM1-212ENST00000496627 WDR72Q3MJ13 1102 aa15.5■□□□□ 0.07
GCOM1-212ENST00000496627 PTPN20Q4JDL3 420 aa15.5■□□□□ 0.07
GCOM1-212ENST00000496627 NOL9Q5SY16 702 aaKnown RBP15.5■□□□□ 0.07
GCOM1-212ENST00000496627 RNF43Q68DV7 783 aa15.5■□□□□ 0.07
GCOM1-212ENST00000496627 DENND1BQ6P3S1 775 aa15.5■□□□□ 0.07
GCOM1-212ENST00000496627 EEPD1Q7L9B9 569 aa15.5■□□□□ 0.07
GCOM1-212ENST00000496627 PCGF5Q86SE9 256 aa15.5■□□□□ 0.07
GCOM1-212ENST00000496627 THNSL1Q8IYQ7 743 aa15.5■□□□□ 0.07
GCOM1-212ENST00000496627 LRRC71Q8N4P6 559 aa15.5■□□□□ 0.07
GCOM1-212ENST00000496627 PRCCQ92733 491 aaPredicted RBP15.5■□□□□ 0.07
GCOM1-212ENST00000496627 MRRFQ96E11 262 aaKnown RBP15.5■□□□□ 0.07
GCOM1-212ENST00000496627 YY1AP1Q9H869 796 aa15.5■□□□□ 0.07
GCOM1-212ENST00000496627 NXF1Q9UBU9 619 aaKnown RBP15.5■□□□□ 0.07
GCOM1-212ENST00000496627 SMG5Q9UPR3 1016 aaKnown RBP15.5■□□□□ 0.07
GCOM1-212ENST00000496627 PPME1Q9Y570 386 aa15.5■□□□□ 0.07
GCOM1-212ENST00000496627 GOLGA8MH3BSY2 632 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 IGF2BP3O00425 579 aaKnown RBP eCLIP15.49■□□□□ 0.07
GCOM1-212ENST00000496627 ALOX15BO15296 676 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 PRPF4O43172 522 aaKnown RBP eCLIP15.49■□□□□ 0.07
GCOM1-212ENST00000496627 ASMTLO95671 621 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 KRT3P12035 628 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 ASPAP45381 313 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 KCNJ2P63252 427 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 OTUD4Q01804 1114 aaKnown RBP15.49■□□□□ 0.07
GCOM1-212ENST00000496627 PKN2Q16513 984 aaKnown RBP15.49■□□□□ 0.07
GCOM1-212ENST00000496627 HIF1AQ16665 826 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 HADHQ16836 314 aaKnown RBP15.49■□□□□ 0.07
GCOM1-212ENST00000496627 METTL7BQ6UX53 244 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 FITM2Q8N6M3 262 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 KLHL29Q96CT2 875 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 C2orf40Q9H1Z8 148 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 PPCSQ9HAB8 311 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 GGA3Q9NZ52 723 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 PPP1R1BQ9UD71 204 aaPredicted RBP15.49■□□□□ 0.07
GCOM1-212ENST00000496627 PNMA3Q9UL41 463 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 SOWAHBA6NEL2 793 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 HGSO14964 777 aaPredicted RBP15.49■□□□□ 0.07
GCOM1-212ENST00000496627 MED7O43513 233 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 GAS2O43903 313 aaKnown RBP15.49■□□□□ 0.07
GCOM1-212ENST00000496627 KRT7P08729 469 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 MAP2K2P36507 400 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 OSTNP61366 133 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 LY6KQ17RY6 165 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 SH3D19Q5HYK7 790 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 WLSQ5T9L3 541 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 MPZL3Q6UWV2 235 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 LBX2Q6XYB7 198 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 NCAPG2Q86XI2 1143 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 ANKMY2Q8IV38 441 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 C4orf33Q8N1A6 199 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 SLC35B2Q8TB61 432 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 ACTL9Q8TC94 416 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 KIF9Q9HAQ2 790 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 PSMC3IPQ9P2W1 217 aaPredicted RBP15.49■□□□□ 0.07
GCOM1-212ENST00000496627 SLC24A2Q9UI40 661 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 POLIQ9UNA4 740 aa15.49■□□□□ 0.07
GCOM1-212ENST00000496627 FZD9O00144 591 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 KRT19P08727 400 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 EDNRBP24530 442 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 RFC1P35251 1148 aaPredicted RBP15.48■□□□□ 0.07
GCOM1-212ENST00000496627 RAP1GAPP47736 663 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 CTCFP49711 727 aaPredicted RBP15.48■□□□□ 0.07
GCOM1-212ENST00000496627 PSMC1P62191 440 aaKnown RBP15.48■□□□□ 0.07
GCOM1-212ENST00000496627 ACVR2BQ13705 512 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 TREML2Q5T2D2 321 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 RIOX2Q8IUF8 465 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 TTC13Q8NBP0 860 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 TRPM4Q8TD43 1214 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 SYNCQ9H7C4 482 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 BTBD7Q9P203 1132 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 A0A0G2JMZ2 1700 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 LRRC37A2A6NM11 1700 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 POLR2AP24928 1970 aaKnown RBP15.48■□□□□ 0.07
GCOM1-212ENST00000496627 C3orf70A6NLC5 250 aaPredicted RBP15.48■□□□□ 0.07
GCOM1-212ENST00000496627 SIGLEC16A6NMB1 481 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 ABLIM1O14639 778 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 CST8O60676 142 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 BANF1O75531 89 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 TGFB3P10600 412 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 IBSPP21815 317 aaPredicted RBP15.48■□□□□ 0.07
GCOM1-212ENST00000496627 CA4P22748 312 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 PHBP35232 272 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 PSMC4P43686 418 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 BAG6P46379 1132 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 SLC25A11Q02978 314 aaKnown RBP15.48■□□□□ 0.07
GCOM1-212ENST00000496627 DNAJC3Q13217 504 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 RIPK1Q13546 671 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 CCDC142Q17RM4 750 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 DEFB132Q7Z7B7 95 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 TRIM50Q86XT4 487 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 RHPN2Q8IUC4 686 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 PPIL6Q8IXY8 311 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 JOSD2Q8TAC2 188 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 RSAD2Q8WXG1 361 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 TBC1D31Q96DN5 1066 aa15.48■□□□□ 0.07
GCOM1-212ENST00000496627 FRMD8P1Q9BZ68 369 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms