RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 HOMER3Q9NSC5 361 aa12.16□□□□□ -0.46
CDCA7-208ENST00000496441 PAPPA2Q9BXP8 1791 aa12.16□□□□□ -0.46
CDCA7-208ENST00000496441 STAG3L1P0CL83 205 aa12.16□□□□□ -0.46
CDCA7-208ENST00000496441 TGFB3P10600 412 aa12.16□□□□□ -0.46
CDCA7-208ENST00000496441 KRT15P19012 456 aa12.16□□□□□ -0.46
CDCA7-208ENST00000496441 STX2P32856 288 aa12.16□□□□□ -0.46
CDCA7-208ENST00000496441 ABCD1P33897 745 aa12.16□□□□□ -0.46
CDCA7-208ENST00000496441 ATP11AP98196 1134 aa12.16□□□□□ -0.46
CDCA7-208ENST00000496441 PDIA2Q13087 525 aaKnown RBP12.16□□□□□ -0.46
CDCA7-208ENST00000496441 AMHR2Q16671 573 aa12.16□□□□□ -0.46
CDCA7-208ENST00000496441 SPDYCQ5MJ68 293 aa12.16□□□□□ -0.46
CDCA7-208ENST00000496441 VSTM1Q6UX27 236 aa12.16□□□□□ -0.46
CDCA7-208ENST00000496441 RCOR2Q8IZ40 523 aa12.16□□□□□ -0.46
CDCA7-208ENST00000496441 ACTL9Q8TC94 416 aa12.16□□□□□ -0.46
CDCA7-208ENST00000496441 TCP11Q8WWU5 503 aa12.16□□□□□ -0.46
CDCA7-208ENST00000496441 NLRP7Q8WX94 980 aa12.16□□□□□ -0.46
CDCA7-208ENST00000496441 ACKR2O00590 384 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 POLR2BP30876 1174 aaKnown RBP12.15□□□□□ -0.46
CDCA7-208ENST00000496441 MAN1A1P33908 653 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 ZNF132P52740 706 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 OTUD4Q01804 1114 aaKnown RBP12.15□□□□□ -0.46
CDCA7-208ENST00000496441 MCL1Q07820 350 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 MMRN1Q13201 1228 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 TFDP3Q5H9I0 405 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 SCYL2Q6P3W7 929 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 KCNV1Q6PIU1 500 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 ANKS4BQ8N8V4 417 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 KCTD6Q8NC69 237 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 RBM41Q96IZ5 413 aaKnown RBP12.15□□□□□ -0.46
CDCA7-208ENST00000496441 PIWIL1Q96J94 861 aaKnown RBP12.15□□□□□ -0.46
CDCA7-208ENST00000496441 VCPIP1Q96JH7 1222 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 FAM167AQ96KS9 214 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 ABCF3Q9NUQ8 709 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 SIX4Q9UIU6 781 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 AGAP1Q9UPQ3 857 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 BRCA1P38398 1863 aaKnown RBP12.15□□□□□ -0.46
CDCA7-208ENST00000496441 GOLGA8RI6L899 631 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 ABLIM1O14639 778 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 LRCH4O75427 683 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 ERBB2P04626 1255 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 PAEPP09466 180 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 KLRC2P26717 231 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 MCCD1P59942 119 aaPredicted RBP12.15□□□□□ -0.46
CDCA7-208ENST00000496441 ACTN3Q08043 901 aaPredicted RBP12.15□□□□□ -0.46
CDCA7-208ENST00000496441 ANKRD20A8PQ5CZ79 823 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 FAM102AQ5T9C2 384 aaPredicted RBP12.15□□□□□ -0.46
CDCA7-208ENST00000496441 NPNTQ6UXI9 565 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 SPATS2Q86XZ4 545 aaKnown RBP12.15□□□□□ -0.46
CDCA7-208ENST00000496441 RFX6Q8HWS3 928 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 ARFGAP1Q8N6T3 406 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 SPOCK2Q92563 424 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 KLF6Q99612 283 aaPredicted RBP12.15□□□□□ -0.46
CDCA7-208ENST00000496441 LPIN3Q9BQK8 851 aa12.15□□□□□ -0.46
CDCA7-208ENST00000496441 hCG_1818297A0A087WSY0 165 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 SSTR1P30872 391 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 GCLCP48506 637 aaPredicted RBP12.14□□□□□ -0.47
CDCA7-208ENST00000496441 BASP1P80723 227 aaKnown RBP12.14□□□□□ -0.47
CDCA7-208ENST00000496441 EFTUD2Q15029 972 aaKnown RBP eCLIP12.14□□□□□ -0.471e-7■■■■■ 32.2
CDCA7-208ENST00000496441 C15orf59Q2T9L4 293 aaPredicted RBP12.14□□□□□ -0.47
CDCA7-208ENST00000496441 GLRA4Q5JXX5 417 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 SLCO2A1Q92959 643 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 APOL6Q9BWW8 343 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 C12orf65Q9H3J6 166 aaKnown RBP12.14□□□□□ -0.47
CDCA7-208ENST00000496441 FAM49BQ9NUQ9 324 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 HES2Q9Y543 173 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 A0A0G2JLL6 359 aaPredicted RBP12.14□□□□□ -0.47
CDCA7-208ENST00000496441 WDR91A4D1P6 747 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 ADCYAP1R1P41586 468 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 CDKN2BP42772 138 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 SCTRP47872 440 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 MBTD1Q05BQ5 628 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 ANKRD22Q5VYY1 191 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 PRRT2Q7Z6L0 340 aaPredicted RBP12.14□□□□□ -0.47
CDCA7-208ENST00000496441 ERO1BQ86YB8 467 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 FAM71DQ8N9W8 422 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 AFG1LQ8WV93 481 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 SERPINB12Q96P63 405 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 TGS1Q96RS0 853 aaKnown RBP12.14□□□□□ -0.47
CDCA7-208ENST00000496441 CCDC77Q9BR77 488 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 FAM49AQ9H0Q0 323 aaPredicted RBP12.14□□□□□ -0.47
CDCA7-208ENST00000496441 SMARCAD1Q9H4L7 1026 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 CD248Q9HCU0 757 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 GPATCH2LQ9NWQ4 482 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 CNTN6Q9UQ52 1028 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 TRIP11Q15643 1979 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 PTPRFP10586 1907 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 RAD23BP54727 409 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 TFDP1Q14186 410 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 PKN2Q16513 984 aaKnown RBP12.14□□□□□ -0.47
CDCA7-208ENST00000496441 HIBCHQ6NVY1 386 aaPredicted RBP12.14□□□□□ -0.47
CDCA7-208ENST00000496441 C3orf20Q8ND61 904 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 RSAD2Q8WXG1 361 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 ELOVL4Q9GZR5 314 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 IFT122Q9HBG6 1241 aa12.14□□□□□ -0.47
CDCA7-208ENST00000496441 ADARB2Q9NS39 739 aaKnown RBP12.14□□□□□ -0.47
CDCA7-208ENST00000496441 TPX2Q9ULW0 747 aaKnown RBP12.14□□□□□ -0.47
CDCA7-208ENST00000496441 LTBP3Q9NS15 1303 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 F5H423 210 aaPredicted RBP12.13□□□□□ -0.47
CDCA7-208ENST00000496441 PIGHQ14442 188 aaPredicted RBP12.13□□□□□ -0.47
CDCA7-208ENST00000496441 TTLL4Q14679 1199 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms