RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 AP3M2P53677 418 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 NAB2Q15742 525 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 SLC18A3Q16572 532 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 DCAF17Q5H9S7 520 aaPredicted RBP9.07□□□□□ -0.96
VPS13B-206ENST00000496144 C10orf76Q5T2E6 689 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 IL31Q6EBC2 164 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 KSR1Q8IVT5 923 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 RUBCNQ92622 972 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 EDAQ92838 391 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 IRF7Q92985 503 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 SPACA7Q96KW9 195 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 ADAMTS10Q9H324 1103 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 PLEKHA5Q9HAU0 1116 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 MAGED2Q9UNF1 606 aaPredicted RBP9.07□□□□□ -0.96
VPS13B-206ENST00000496144 WDR81Q562E7 1941 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 ZNF185O15231 689 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 AKR1B10O60218 316 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 EXOC3L4Q17RC7 722 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 NT5DC4Q86YG4 428 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 RNF10Q8N5U6 811 aaKnown RBP9.07□□□□□ -0.96
VPS13B-206ENST00000496144 MSANTD3Q96H12 275 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 FUT8Q9BYC5 575 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 NRDE2Q9H7Z3 1164 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 ARFGAP3Q9NP61 516 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 MAP2K7O14733 419 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 RBP5P82980 135 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 TDRD12Q587J7 1177 aaKnown RBP9.07□□□□□ -0.96
VPS13B-206ENST00000496144 GBP6Q6ZN66 633 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 NOA1Q8NC60 698 aaKnown RBP9.07□□□□□ -0.96
VPS13B-206ENST00000496144 SLC35C1Q96A29 364 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 NECAB3Q96P71 396 aaPredicted RBP9.07□□□□□ -0.96
VPS13B-206ENST00000496144 NOX5Q96PH1 765 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 TRMT61BQ9BVS5 477 aaKnown RBP9.07□□□□□ -0.96
VPS13B-206ENST00000496144 DMAC2Q9NW81 257 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 AJAP1Q9UKB5 411 aaPredicted RBP9.07□□□□□ -0.96
VPS13B-206ENST00000496144 USTQ9Y2C2 406 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 PCDHB5Q9Y5E4 795 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 EXOC3O60645 756 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 RHOXF2BP0C7M4 288 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 UCHL3P15374 230 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 MAPK7Q13164 816 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 UGCGQ16739 394 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 ZNF852Q6ZMS4 543 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 PRR23BQ6ZRT6 265 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 DPH6Q7L8W6 267 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 ZDHHC14Q8IZN3 488 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 CAPZA3Q96KX2 299 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 RHOXF2Q9BQY4 288 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 C8orf33Q9H7E9 229 aaPredicted RBP9.07□□□□□ -0.96
VPS13B-206ENST00000496144 SALL4Q9UJQ4 1053 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 ASB3Q9Y575 518 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 BZW2Q9Y6E2 419 aaKnown RBP9.07□□□□□ -0.96
VPS13B-206ENST00000496144 TUBBP07437 444 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 SLC9A1P19634 815 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 GRM5P41594 1212 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 MAGEA1P43355 309 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 RAPGEF1Q13905 1077 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 LONRF2Q1L5Z9 754 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 BEND6Q5SZJ8 279 aaPredicted RBP9.06□□□□□ -0.96
VPS13B-206ENST00000496144 IRF2BP2Q7Z5L9 587 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 DDX42Q86XP3 938 aaKnown RBP eCLIP9.06□□□□□ -0.96
VPS13B-206ENST00000496144 SIX5Q8N196 739 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 GCNT4Q9P109 453 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 SH3BP1Q9Y3L3 701 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 ZNF233A6NK53 670 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 ERLIN1O75477 346 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 MCM3P25205 808 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 OVOS1Q6IE37 1185 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 FAM186BQ8IYM0 893 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 ASAP3Q8TDY4 903 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 LRFN3Q9BTN0 628 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 NFKBIZQ9BYH8 718 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 AGPAT3Q9NRZ7 376 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 AGO2Q9UKV8 859 aaKnown RBP9.06□□□□□ -0.96
VPS13B-206ENST00000496144 HYOU1Q9Y4L1 999 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 ZNFX1Q9P2E3 1918 aaKnown RBP9.06□□□□□ -0.96
VPS13B-206ENST00000496144 GPR37L1O60883 481 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 TOM1L1O75674 476 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 OR1D2P34982 312 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 RARRES1P49788 294 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 C2orf54Q08AI8 447 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 IFRD2Q12894 506 aaPredicted RBP9.06□□□□□ -0.96
VPS13B-206ENST00000496144 CREG2Q8IUH2 290 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 GPIHBP1Q8IV16 184 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 SLC9A9Q8IVB4 645 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 TTC39CQ8N584 583 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 SLC7A14Q8TBB6 771 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 OSBPL9Q96SU4 736 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 CRACR2AQ9BSW2 395 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.06□□□□□ -0.967e-7■■■■■ 178.2
VPS13B-206ENST00000496144 NDRG2Q9UN36 371 aaKnown RBP9.06□□□□□ -0.96
VPS13B-206ENST00000496144 CFHP08603 1231 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 GLRA2P23416 452 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 DDX6P26196 483 aaKnown RBP eCLIP9.06□□□□□ -0.96
VPS13B-206ENST00000496144 PRKCIP41743 596 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 MCCD1P59942 119 aaPredicted RBP9.06□□□□□ -0.96
VPS13B-206ENST00000496144 KLHL30Q0D2K2 578 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 DHX33Q9H6R0 707 aaKnown RBP9.06□□□□□ -0.96
VPS13B-206ENST00000496144 POLD4Q9HCU8 107 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 ABCB6Q9NP58 842 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms