RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 GAREM2Q75VX8 874 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 DPH6Q7L8W6 267 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 ITIH5Q86UX2 942 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 APPL2Q8NEU8 664 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 ASAP3Q8TDY4 903 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 SETD7Q8WTS6 366 aaKnown RBP10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 RUFY2Q8WXA3 655 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 BAP1Q92560 729 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 PPP1R10Q96QC0 940 aaKnown RBP10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 PI4K2AQ9BTU6 479 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 SLC6A16Q9GZN6 736 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 DNAJC25Q9H1X3 360 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 SLKQ9H2G2 1235 aaPredicted RBP10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 MMP17Q9ULZ9 603 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 ASB3Q9Y575 518 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 TEX15Q9BXT5 2789 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 TNRC6BQ9UPQ9 1833 aaKnown RBP10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 ATG2BQ96BY7 2078 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 ARID2Q68CP9 1835 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 B8ZZF3 427 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 PODXLO00592 558 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 ADAMTS3O15072 1205 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 SLC28A2O43868 658 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 S1PR4O95977 384 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 CDC25CP30307 473 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 AVPR1AP37288 418 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 EIF2S3P41091 472 aaKnown RBP10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 CYP4F8P98187 520 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 RPL6Q02878 288 aaKnown RBP10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 MRPL58Q14197 206 aaKnown RBP10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 PDGFRLQ15198 375 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 PLEKHG6Q3KR16 790 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 Q4G0T1 1027 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 C2orf27AQ580R0 203 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 TMEM164Q5U3C3 297 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 SGMS1Q86VZ5 419 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 MARCH9Q86YJ5 346 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 NOSTRINQ8IVI9 506 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 USP33Q8TEY7 942 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 EZH1Q92800 747 aaPredicted RBP10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 PSMG2Q969U7 264 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 NXPE2Q96DL1 559 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 CCDC43Q96MW1 224 aaKnown RBP10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 PGLYRP2Q96PD5 576 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 PNMA5Q96PV4 448 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 LXNQ9BS40 222 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 LRRC2Q9BYS8 371 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 OSBPL3Q9H4L5 887 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 PDZD7Q9H5P4 517 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 KIF9Q9HAQ2 790 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 ZMYM5Q9UJ78 669 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 PCOLCE2Q9UKZ9 415 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 TBX20Q9UMR3 447 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 PCDH15Q96QU1 1955 aa10.5□□□□□ -0.73
SMARCAL1-213ENST00000496037 PTPN13Q12923 2485 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 PTPRBP23467 1997 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 FAM149AA5PLN7 773 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 LRRIQ4A6NIV6 560 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 EML1O00423 815 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 ZBTB43O43298 467 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 GJB3O75712 270 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 GLRA2P23416 452 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 ERCC5P28715 1186 aaPredicted RBP10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 MCM4P33991 863 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 ZNF33AQ06730 810 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 DUSP4Q13115 394 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 APOA5Q6Q788 366 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 DNAJB7Q7Z6W7 309 aaPredicted RBP10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 ZBTB8OSQ8IWT0 167 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 C4orf19Q8IY42 314 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 PGBD3Q8N328 593 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 CCDC33Q8N5R6 958 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 FRMD1Q8N878 549 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 XPNPEP1Q9NQW7 623 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 SLC38A7Q9NVC3 462 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 WRAP73Q9P2S5 460 aaPredicted RBP10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 DNMT3LQ9UJW3 386 aa10.49□□□□□ -0.73
SMARCAL1-213ENST00000496037 ADAMTS9Q9P2N4 1935 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 MUC22E2RYF6 1773 aaPredicted RBP10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 GOLGA8AA7E2F4 631 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 GOLGA8BA8MQT2 603 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 RNF223E7ERA6 249 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 CBFA2T3O75081 653 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 TDP2O95551 362 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 MARCKSP29966 332 aaPredicted RBP10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 ARL2P36404 184 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 IL12RB1P42701 662 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 CSRP3P50461 194 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 CXADRP78310 365 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 PRPF4BQ13523 1007 aaKnown RBP10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 VEPH1Q14D04 833 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 TAF12Q16514 161 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 MAP7D1Q3KQU3 841 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 DCAF4L1Q3SXM0 396 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 PCSK4Q6UW60 755 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 SLC36A4Q6YBV0 504 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 CMTM8Q8IZV2 173 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 DEFB119Q8N690 84 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 CCDC148Q8NFR7 591 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 BEST2Q8NFU1 509 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms