RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 LIPAP38571 399 aa5.4□□□□□ -1.54
SRRM1-219ENST00000495561 FXR1P51114 621 aaKnown RBP eCLIP5.4□□□□□ -1.54
SRRM1-219ENST00000495561 EEFSECP57772 596 aaKnown RBP5.4□□□□□ -1.54
SRRM1-219ENST00000495561 BOP1Q14137 746 aaKnown RBP5.4□□□□□ -1.54
SRRM1-219ENST00000495561 UAP1L1Q3KQV9 507 aa5.4□□□□□ -1.54
SRRM1-219ENST00000495561 DTX2Q86UW9 622 aa5.4□□□□□ -1.54
SRRM1-219ENST00000495561 DDX42Q86XP3 938 aaKnown RBP eCLIP5.4□□□□□ -1.54
SRRM1-219ENST00000495561 FAM90A1Q86YD7 464 aa5.4□□□□□ -1.54
SRRM1-219ENST00000495561 PRSS22Q9GZN4 317 aa5.4□□□□□ -1.54
SRRM1-219ENST00000495561 ANLNQ9NQW6 1124 aa5.4□□□□□ -1.54
SRRM1-219ENST00000495561 SMIM35A0A1B0GVV1 85 aa5.39□□□□□ -1.55
SRRM1-219ENST00000495561 DNAJB5O75953 348 aa5.39□□□□□ -1.55
SRRM1-219ENST00000495561 CLCN2P51788 898 aa5.39□□□□□ -1.55
SRRM1-219ENST00000495561 FOXG1P55316 489 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-219ENST00000495561 PCBP2Q15366 365 aaKnown RBP eCLIP5.39□□□□□ -1.55
SRRM1-219ENST00000495561 SYDE2Q5VT97 1194 aa5.39□□□□□ -1.55
SRRM1-219ENST00000495561 AWAT2Q6E213 333 aa5.39□□□□□ -1.55
SRRM1-219ENST00000495561 CATSPERGQ6ZRH7 1159 aa5.39□□□□□ -1.55
SRRM1-219ENST00000495561 WDR53Q7Z5U6 358 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-219ENST00000495561 RGMAQ96B86 450 aa5.39□□□□□ -1.55
SRRM1-219ENST00000495561 NELL2Q99435 816 aa5.39□□□□□ -1.55
SRRM1-219ENST00000495561 KCNU1A8MYU2 1149 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 SLC16A3O15427 465 aaKnown RBP5.38□□□□□ -1.55
SRRM1-219ENST00000495561 CLSTN1O94985 981 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 FTH1P19P0C7X4 201 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 MMP13P45452 471 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 CYP4F2P78329 520 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 KRT85P78386 507 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 PCID2Q5JVF3 399 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 TMEM108Q6UXF1 575 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 CRELD2Q6UXH1 353 aaPredicted RBP5.38□□□□□ -1.55
SRRM1-219ENST00000495561 USP37Q86T82 979 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 CHSY1Q86X52 802 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 C3orf20Q8ND61 904 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 CAMKK2Q96RR4 588 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 MACROD1Q9BQ69 325 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 VPS16Q9H269 839 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 DUSP22Q9NRW4 184 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 TRHDEQ9UKU6 1024 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 PRKAB1Q9Y478 270 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 PCDHA3Q9Y5H8 950 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 MRFAP1Q9Y605 127 aa5.38□□□□□ -1.55
SRRM1-219ENST00000495561 M0QYG6 137 aa5.37□□□□□ -1.55
SRRM1-219ENST00000495561 TLR5O60602 858 aa5.37□□□□□ -1.55
SRRM1-219ENST00000495561 IL6RP08887 468 aaPredicted RBP5.37□□□□□ -1.55
SRRM1-219ENST00000495561 ARHGAP25P42331 645 aa5.37□□□□□ -1.55
SRRM1-219ENST00000495561 ZNF134P52741 427 aa5.37□□□□□ -1.55
SRRM1-219ENST00000495561 SP2Q02086 613 aa5.37□□□□□ -1.55
SRRM1-219ENST00000495561 TREML2Q5T2D2 321 aa5.37□□□□□ -1.55
SRRM1-219ENST00000495561 ICE2Q659A1 982 aa5.37□□□□□ -1.55
SRRM1-219ENST00000495561 NAPRTQ6XQN6 538 aa5.37□□□□□ -1.55
SRRM1-219ENST00000495561 ZNF517Q6ZMY9 492 aaPredicted RBP5.37□□□□□ -1.55
SRRM1-219ENST00000495561 GALNT16Q8N428 558 aa5.37□□□□□ -1.55
SRRM1-219ENST00000495561 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.37□□□□□ -1.55
SRRM1-219ENST00000495561 PNLDC1Q8NA58 520 aaKnown RBP5.37□□□□□ -1.55
SRRM1-219ENST00000495561 BRIP1Q9BX63 1249 aa5.37□□□□□ -1.55
SRRM1-219ENST00000495561 TUBA8Q9NY65 449 aaPredicted RBP5.37□□□□□ -1.55
SRRM1-219ENST00000495561 ZDHHC8Q9ULC8 765 aa5.37□□□□□ -1.55
SRRM1-219ENST00000495561 SH2B3Q9UQQ2 575 aa5.37□□□□□ -1.55
SRRM1-219ENST00000495561 POLHQ9Y253 713 aa5.37□□□□□ -1.55
SRRM1-219ENST00000495561 CYP2D7A0A087X1C5 515 aa5.36□□□□□ -1.55
SRRM1-219ENST00000495561 ONECUT2O95948 504 aa5.36□□□□□ -1.55
SRRM1-219ENST00000495561 ENGP17813 658 aa5.36□□□□□ -1.55
SRRM1-219ENST00000495561 NR4A2P43354 598 aa5.36□□□□□ -1.55
SRRM1-219ENST00000495561 ADKP55263 362 aaKnown RBP5.36□□□□□ -1.55
SRRM1-219ENST00000495561 HOXA4Q00056 320 aaPredicted RBP5.36□□□□□ -1.55
SRRM1-219ENST00000495561 C8orf58Q8NAV2 365 aa5.36□□□□□ -1.55
SRRM1-219ENST00000495561 TNPO1Q92973 898 aaKnown RBP5.36□□□□□ -1.55
SRRM1-219ENST00000495561 C5orf34Q96MH7 638 aa5.36□□□□□ -1.55
SRRM1-219ENST00000495561 ASB2Q96Q27 587 aa5.36□□□□□ -1.55
SRRM1-219ENST00000495561 KRTAP2-2Q9BYT5 123 aa5.36□□□□□ -1.55
SRRM1-219ENST00000495561 PDGFCQ9NRA1 345 aa5.36□□□□□ -1.55
SRRM1-219ENST00000495561 SHTN1A0MZ66 631 aa5.35□□□□□ -1.55
SRRM1-219ENST00000495561 ARIH2O95376 493 aa5.35□□□□□ -1.55
SRRM1-219ENST00000495561 GNAI2P04899 355 aa5.35□□□□□ -1.55
SRRM1-219ENST00000495561 LAMB3Q13751 1172 aa5.35□□□□□ -1.55
SRRM1-219ENST00000495561 DAZAP2Q15038 168 aaPredicted RBP5.35□□□□□ -1.55
SRRM1-219ENST00000495561 RABEP1Q15276 862 aa5.35□□□□□ -1.55
SRRM1-219ENST00000495561 EFCAB2Q5VUJ9 269 aa5.35□□□□□ -1.55
SRRM1-219ENST00000495561 FAM160B1Q5W0V3 765 aa5.35□□□□□ -1.55
SRRM1-219ENST00000495561 SFRP4Q6FHJ7 346 aaPredicted RBP5.35□□□□□ -1.55
SRRM1-219ENST00000495561 CNGA4Q8IV77 575 aa5.35□□□□□ -1.55
SRRM1-219ENST00000495561 FAM46DQ8NEK8 389 aa5.35□□□□□ -1.55
SRRM1-219ENST00000495561 CYP2W1Q8TAV3 490 aa5.35□□□□□ -1.55
SRRM1-219ENST00000495561 DDX17Q92841 729 aaKnown RBP5.35□□□□□ -1.55
SRRM1-219ENST00000495561 HMCESQ96FZ2 354 aa5.35□□□□□ -1.55
SRRM1-219ENST00000495561 FSD1LQ9BXM9 530 aa5.35□□□□□ -1.55
SRRM1-219ENST00000495561 MRPL46Q9H2W6 279 aaKnown RBP5.35□□□□□ -1.55
SRRM1-219ENST00000495561 WDCPQ9H6R7 721 aa5.35□□□□□ -1.55
SRRM1-219ENST00000495561 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.35□□□□□ -1.55
SRRM1-219ENST00000495561 SERTAD3Q9UJW9 196 aa5.35□□□□□ -1.55
SRRM1-219ENST00000495561 ADAMTS5Q9UNA0 930 aa5.35□□□□□ -1.55
SRRM1-219ENST00000495561 GABRDO14764 452 aa5.34□□□□□ -1.55
SRRM1-219ENST00000495561 DCLK1O15075 740 aa5.34□□□□□ -1.55
SRRM1-219ENST00000495561 KRTAP10-7P60409 375 aaPredicted RBP5.34□□□□□ -1.55
SRRM1-219ENST00000495561 NOGQ13253 232 aa5.34□□□□□ -1.55
SRRM1-219ENST00000495561 MTMR1Q13613 665 aa5.34□□□□□ -1.55
SRRM1-219ENST00000495561 ODF1Q14990 250 aa5.34□□□□□ -1.55
SRRM1-219ENST00000495561 GPR162Q16538 588 aa5.34□□□□□ -1.55
SRRM1-219ENST00000495561 ZNF260Q3ZCT1 412 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms