RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 AFG3L2Q9Y4W6 797 aa5.21□□□□□ -1.58
VPS50-219ENST00000495039 CCDC154A6NI56 674 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 BCAR3O75815 825 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 C5AR1P21730 350 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 CCKARP32238 428 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 GCLCP48506 637 aaPredicted RBP5.2□□□□□ -1.58
VPS50-219ENST00000495039 MASP1P48740 699 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 RGS19P49795 217 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 CYP4F2P78329 520 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 TCF15Q12870 199 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 ACAP2Q15057 778 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 LRRC41Q15345 812 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 SFRP4Q6FHJ7 346 aaPredicted RBP5.2□□□□□ -1.58
VPS50-219ENST00000495039 NAPRTQ6XQN6 538 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 TRIM72Q6ZMU5 477 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 MRPL10Q7Z7H8 261 aaKnown RBP5.2□□□□□ -1.58
VPS50-219ENST00000495039 TTC7BQ86TV6 843 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 NANOGP1Q8N7R0 232 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 NSUN6Q8TEA1 469 aaKnown RBP5.2□□□□□ -1.58
VPS50-219ENST00000495039 PIGOQ8TEQ8 1089 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 KAT5Q92993 513 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 VRK1Q99986 396 aaPredicted RBP5.2□□□□□ -1.58
VPS50-219ENST00000495039 TRNAU1APQ9NX07 287 aaKnown RBP5.2□□□□□ -1.58
VPS50-219ENST00000495039 MTMR4Q9NYA4 1195 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 WWOXQ9NZC7 414 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 TBX22Q9Y458 520 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 LRP12Q9Y561 859 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 WDR17Q8IZU2 1322 aa5.2□□□□□ -1.58
VPS50-219ENST00000495039 IGKV2D-30A0A075B6S6 120 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 NT5C1B-RDH14C9J2C7 533 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 E5RJQ4 531 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 KIF20AO95235 890 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 IL6RP08887 468 aaPredicted RBP5.19□□□□□ -1.58
VPS50-219ENST00000495039 RARBP10826 455 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 ENGP17813 658 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 EDNRBP24530 442 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 SMARCA1P28370 1054 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 CNGA1P29973 690 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 LIPAP38571 399 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 ZNF134P52741 427 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 Q4G0T1 1027 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 KHDC1Q4VXA5 237 aaKnown RBP5.19□□□□□ -1.58
VPS50-219ENST00000495039 MIDNQ504T8 468 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 TREML2Q5T2D2 321 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 ICE2Q659A1 982 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 PGM2L1Q6PCE3 622 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 MAVSQ7Z434 540 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 CYP2W1Q8TAV3 490 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 ADAMTS15Q8TE58 950 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 TINAGL1Q9GZM7 467 aaPredicted RBP5.19□□□□□ -1.58
VPS50-219ENST00000495039 MKS1Q9NXB0 559 aa5.19□□□□□ -1.58
VPS50-219ENST00000495039 CFAP20Q9Y6A4 193 aaKnown RBP5.19□□□□□ -1.58
VPS50-219ENST00000495039 NPSP0C0P6 89 aa5.18□□□□□ -1.58
VPS50-219ENST00000495039 TOB1P50616 345 aaPredicted RBP5.18□□□□□ -1.58
VPS50-219ENST00000495039 CLCN2P51788 898 aa5.18□□□□□ -1.58
VPS50-219ENST00000495039 SNAPC2Q13487 334 aa5.18□□□□□ -1.58
VPS50-219ENST00000495039 PPP1R32Q7Z5V6 425 aa5.18□□□□□ -1.58
VPS50-219ENST00000495039 NOP9Q86U38 636 aaKnown RBP5.18□□□□□ -1.58
VPS50-219ENST00000495039 LRRC71Q8N4P6 559 aa5.18□□□□□ -1.58
VPS50-219ENST00000495039 NSMCE1Q8WV22 266 aa5.18□□□□□ -1.58
VPS50-219ENST00000495039 FSD1LQ9BXM9 530 aa5.18□□□□□ -1.58
VPS50-219ENST00000495039 SLAMF7Q9NQ25 335 aa5.18□□□□□ -1.58
VPS50-219ENST00000495039 ADAMTS5Q9UNA0 930 aa5.18□□□□□ -1.58
VPS50-219ENST00000495039 CCDC187A0A096LP49 1063 aa5.17□□□□□ -1.58
VPS50-219ENST00000495039 H7C1Q1 480 aa5.17□□□□□ -1.58
VPS50-219ENST00000495039 FGBP02675 491 aa5.17□□□□□ -1.58
VPS50-219ENST00000495039 PIK3CGP48736 1102 aa5.17□□□□□ -1.58
VPS50-219ENST00000495039 KIF23Q02241 960 aaPredicted RBP5.17□□□□□ -1.58
VPS50-219ENST00000495039 KIF22Q14807 665 aa5.17□□□□□ -1.58
VPS50-219ENST00000495039 CERKLQ49MI3 558 aaPredicted RBP5.17□□□□□ -1.58
VPS50-219ENST00000495039 TMEM108Q6UXF1 575 aa5.17□□□□□ -1.58
VPS50-219ENST00000495039 ATL2Q8NHH9 583 aa5.17□□□□□ -1.58
VPS50-219ENST00000495039 RP9Q8TA86 221 aaKnown RBP5.17□□□□□ -1.58
VPS50-219ENST00000495039 DAZAP1Q96EP5 407 aaKnown RBP5.17□□□□□ -1.58
VPS50-219ENST00000495039 RITA1Q96K30 269 aa5.17□□□□□ -1.58
VPS50-219ENST00000495039 MACROD1Q9BQ69 325 aa5.17□□□□□ -1.58
VPS50-219ENST00000495039 AGAP1Q9UPQ3 857 aa5.17□□□□□ -1.58
VPS50-219ENST00000495039 KLHL33A6NCF5 533 aa5.16□□□□□ -1.58
VPS50-219ENST00000495039 PRSS29PA6NIE9 313 aa5.16□□□□□ -1.58
VPS50-219ENST00000495039 PRR23D1E9PI22 279 aaPredicted RBP5.16□□□□□ -1.58
VPS50-219ENST00000495039 USP1O94782 785 aa5.16□□□□□ -1.58
VPS50-219ENST00000495039 GNAI2P04899 355 aa5.16□□□□□ -1.58
VPS50-219ENST00000495039 FTH1P19P0C7X4 201 aa5.16□□□□□ -1.58
VPS50-219ENST00000495039 PRR23D2P0DMB1 279 aaPredicted RBP5.16□□□□□ -1.58
VPS50-219ENST00000495039 PDE1AP54750 535 aa5.16□□□□□ -1.58
VPS50-219ENST00000495039 LINC00205P59089 165 aa5.16□□□□□ -1.58
VPS50-219ENST00000495039 TWIST1Q15672 202 aa5.16□□□□□ -1.58
VPS50-219ENST00000495039 KIAA1161Q6NSJ0 714 aa5.16□□□□□ -1.58
VPS50-219ENST00000495039 SHC4Q6S5L8 630 aa5.16□□□□□ -1.58
VPS50-219ENST00000495039 PARS2Q7L3T8 475 aaKnown RBP5.16□□□□□ -1.58
VPS50-219ENST00000495039 KRT26Q7Z3Y9 468 aa5.16□□□□□ -1.58
VPS50-219ENST00000495039 NRACQ8N912 160 aa5.16□□□□□ -1.58
VPS50-219ENST00000495039 C1orf162Q8NEQ5 155 aaPredicted RBP5.16□□□□□ -1.58
VPS50-219ENST00000495039 DDX17Q92841 729 aaKnown RBP5.16□□□□□ -1.58
VPS50-219ENST00000495039 COA7Q96BR5 231 aa5.16□□□□□ -1.58
VPS50-219ENST00000495039 PUS7Q96PZ0 661 aaKnown RBP5.16□□□□□ -1.58
VPS50-219ENST00000495039 FAM118BQ9BPY3 351 aa5.16□□□□□ -1.58
VPS50-219ENST00000495039 POC1B-GALNT4F8VUJ3 575 aa5.15□□□□□ -1.59
VPS50-219ENST00000495039 VIL1P09327 827 aaKnown RBP5.15□□□□□ -1.59
VPS50-219ENST00000495039 SCP2P22307 547 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms