RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 A8MXQ7 604 aa17.03■□□□□ 0.32
LIME1-209ENST00000494776 ATP2C2O75185 946 aa17.03■□□□□ 0.32
LIME1-209ENST00000494776 FGFR1OPO95684 399 aaKnown RBP17.03■□□□□ 0.32
LIME1-209ENST00000494776 HAPLN1P10915 354 aaPredicted RBP17.03■□□□□ 0.32
LIME1-209ENST00000494776 LAMP2P13473 410 aa17.03■□□□□ 0.32
LIME1-209ENST00000494776 MXI1P50539 228 aa17.03■□□□□ 0.32
LIME1-209ENST00000494776 CDH8P55286 799 aa17.03■□□□□ 0.32
LIME1-209ENST00000494776 MAPRE1Q15691 268 aaKnown RBP17.03■□□□□ 0.32
LIME1-209ENST00000494776 PTPN21Q16825 1174 aa17.03■□□□□ 0.32
LIME1-209ENST00000494776 TMEM31Q5JXX7 168 aa17.03■□□□□ 0.32
LIME1-209ENST00000494776 SPOPLQ6IQ16 392 aa17.03■□□□□ 0.32
LIME1-209ENST00000494776 TTI2Q6NXR4 508 aa17.03■□□□□ 0.32
LIME1-209ENST00000494776 C4orf50Q6ZRC1 276 aa17.03■□□□□ 0.32
LIME1-209ENST00000494776 HS6ST3Q8IZP7 471 aa17.03■□□□□ 0.32
LIME1-209ENST00000494776 TAS1R2Q8TE23 839 aa17.03■□□□□ 0.32
LIME1-209ENST00000494776 FGF13Q92913 245 aa17.03■□□□□ 0.32
LIME1-209ENST00000494776 DUSP9Q99956 384 aaKnown RBP17.03■□□□□ 0.32
LIME1-209ENST00000494776 SMYD3Q9H7B4 428 aa17.03■□□□□ 0.32
LIME1-209ENST00000494776 AVENQ9NQS1 362 aaPredicted RBP17.03■□□□□ 0.32
LIME1-209ENST00000494776 EPS15L1Q9UBC2 864 aa17.03■□□□□ 0.32
LIME1-209ENST00000494776 MAGEC2Q9UBF1 373 aaPredicted RBP17.03■□□□□ 0.32
LIME1-209ENST00000494776 SORCS3Q9UPU3 1222 aa17.03■□□□□ 0.32
LIME1-209ENST00000494776 DENND4AQ7Z401 1863 aa17.03■□□□□ 0.32
LIME1-209ENST00000494776 ASS1P00966 412 aaKnown RBP17.02■□□□□ 0.32
LIME1-209ENST00000494776 RAP1GAPP47736 663 aa17.02■□□□□ 0.32
LIME1-209ENST00000494776 RPL10AP62906 217 aaKnown RBP17.02■□□□□ 0.32
LIME1-209ENST00000494776 CYP27A1Q02318 531 aa17.02■□□□□ 0.32
LIME1-209ENST00000494776 MTMR3Q13615 1198 aa17.02■□□□□ 0.32
LIME1-209ENST00000494776 FOXR2Q6PJQ5 311 aa17.02■□□□□ 0.32
LIME1-209ENST00000494776 FRMD5Q7Z6J6 570 aa17.02■□□□□ 0.32
LIME1-209ENST00000494776 DNAJB7Q7Z6W7 309 aaPredicted RBP17.02■□□□□ 0.32
LIME1-209ENST00000494776 MLKLQ8NB16 471 aa17.02■□□□□ 0.32
LIME1-209ENST00000494776 FBXL13Q8NEE6 735 aa17.02■□□□□ 0.32
LIME1-209ENST00000494776 GIPC2Q8TF65 315 aa17.02■□□□□ 0.32
LIME1-209ENST00000494776 MCRS1Q96EZ8 462 aa17.02■□□□□ 0.32
LIME1-209ENST00000494776 LPIN3Q9BQK8 851 aa17.02■□□□□ 0.32
LIME1-209ENST00000494776 SRRTQ9BXP5 876 aaKnown RBP17.02■□□□□ 0.32
LIME1-209ENST00000494776 DNAJC25Q9H1X3 360 aa17.02■□□□□ 0.32
LIME1-209ENST00000494776 KCNK12Q9HB15 430 aa17.02■□□□□ 0.32
LIME1-209ENST00000494776 ABCB6Q9NP58 842 aa17.02■□□□□ 0.32
LIME1-209ENST00000494776 IGSF9Q9P2J2 1179 aa17.02■□□□□ 0.32
LIME1-209ENST00000494776 GNA14O95837 355 aa17.01■□□□□ 0.31
LIME1-209ENST00000494776 PTPN1P18031 435 aaKnown RBP17.01■□□□□ 0.31
LIME1-209ENST00000494776 TRIM21P19474 475 aaKnown RBP17.01■□□□□ 0.31
LIME1-209ENST00000494776 CYP2F1P24903 491 aa17.01■□□□□ 0.31
LIME1-209ENST00000494776 NOP14P78316 857 aaKnown RBP17.01■□□□□ 0.31
LIME1-209ENST00000494776 ZXDAP98168 799 aa17.01■□□□□ 0.31
LIME1-209ENST00000494776 SLC5A9Q2M3M2 681 aa17.01■□□□□ 0.31
LIME1-209ENST00000494776 MDH1BQ5I0G3 518 aa17.01■□□□□ 0.31
LIME1-209ENST00000494776 WDR44Q5JSH3 913 aa17.01■□□□□ 0.31
LIME1-209ENST00000494776 FAM171BQ6P995 826 aa17.01■□□□□ 0.31
LIME1-209ENST00000494776 CREBRFQ8IUR6 639 aa17.01■□□□□ 0.31
LIME1-209ENST00000494776 SCN4BQ8IWT1 228 aa17.01■□□□□ 0.31
LIME1-209ENST00000494776 MYCBPAPQ8TBZ2 947 aa17.01■□□□□ 0.31
LIME1-209ENST00000494776 EDAQ92838 391 aa17.01■□□□□ 0.31
LIME1-209ENST00000494776 PSMG2Q969U7 264 aa17.01■□□□□ 0.31
LIME1-209ENST00000494776 MYLPFQ96A32 169 aa17.01■□□□□ 0.31
LIME1-209ENST00000494776 TCEAL4Q96EI5 215 aa17.01■□□□□ 0.31
LIME1-209ENST00000494776 FUBP3Q96I24 572 aaKnown RBP eCLIP17.01■□□□□ 0.31
LIME1-209ENST00000494776 PKMYT1Q99640 499 aa17.01■□□□□ 0.31
LIME1-209ENST00000494776 CRTAC1Q9NQ79 661 aa17.01■□□□□ 0.31
LIME1-209ENST00000494776 RAB20Q9NX57 234 aa17.01■□□□□ 0.31
LIME1-209ENST00000494776 RWDD2AQ9UIY3 292 aa17.01■□□□□ 0.31
LIME1-209ENST00000494776 FGF19O95750 216 aa17■□□□□ 0.31
LIME1-209ENST00000494776 CEBPBP17676 345 aa17■□□□□ 0.31
LIME1-209ENST00000494776 ATF6P18850 670 aa17■□□□□ 0.31
LIME1-209ENST00000494776 MCCD1P59942 119 aaPredicted RBP17■□□□□ 0.31
LIME1-209ENST00000494776 TDGQ13569 410 aa17■□□□□ 0.31
LIME1-209ENST00000494776 TPD52L1Q16890 204 aaPredicted RBP17■□□□□ 0.31
LIME1-209ENST00000494776 CCDC142Q17RM4 750 aa17■□□□□ 0.31
LIME1-209ENST00000494776 CFAP221Q4G0U5 840 aa17■□□□□ 0.31
LIME1-209ENST00000494776 PRSS36Q5K4E3 855 aa17■□□□□ 0.31
LIME1-209ENST00000494776 NPAS3Q8IXF0 933 aa17■□□□□ 0.31
LIME1-209ENST00000494776 B3GALNT2Q8NCR0 500 aa17■□□□□ 0.31
LIME1-209ENST00000494776 ST13P5Q8NFI4 369 aaPredicted RBP17■□□□□ 0.31
LIME1-209ENST00000494776 GPT2Q8TD30 523 aa17■□□□□ 0.31
LIME1-209ENST00000494776 GPR152Q8TDT2 470 aa17■□□□□ 0.31
LIME1-209ENST00000494776 NXPE3Q969Y0 559 aa17■□□□□ 0.31
LIME1-209ENST00000494776 TNIP3Q96KP6 325 aa17■□□□□ 0.31
LIME1-209ENST00000494776 SDCBP2Q9H190 292 aa17■□□□□ 0.31
LIME1-209ENST00000494776 DPEP3Q9H4B8 488 aa17■□□□□ 0.31
LIME1-209ENST00000494776 SLITRK6Q9H5Y7 841 aa17■□□□□ 0.31
LIME1-209ENST00000494776 GDE1Q9NZC3 331 aa17■□□□□ 0.31
LIME1-209ENST00000494776 DACH1Q9UI36 760 aa17■□□□□ 0.31
LIME1-209ENST00000494776 FAM86C2PA6NEL3 165 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 MICAL2O94851 1124 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 CCDC192P0DO97 292 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 GJA1P17302 382 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 BDNFP23560 247 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 ANXA13P27216 316 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 GRIK1P39086 918 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 CCR2P41597 374 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 ASPAP45381 313 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 GPR15P49685 360 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 EPHA5P54756 1037 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 NLRP12P59046 1061 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 DDR2Q16832 855 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 CBWD6Q4V339 395 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 CBWD3Q5JTY5 395 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 CBWD5Q5RIA9 395 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms