RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 NCSTNQ92542 709 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 TUBB6Q9BUF5 446 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 ZCWPW1Q9H0M4 648 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 PCDH9Q9HC56 1237 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 hCG_1818297A0A087WSY0 165 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 NPTX2P47972 431 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 ARL4CP56559 192 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 CLDN10P78369 228 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 CES4AQ5XG92 561 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 SPOCD1Q6ZMY3 1216 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 NAT8LQ8N9F0 302 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 SLC35B2Q8TB61 432 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 ACER1Q8TDN7 264 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 CPT1BQ92523 772 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 FGD4Q96M96 766 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 GORASP1Q9BQQ3 440 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 IVNS1ABPQ9Y6Y0 642 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 TLR3O15455 904 aaKnown RBP16.14■□□□□ 0.17
SDF4-207ENST00000494748 NPM3O75607 178 aaKnown RBP16.14■□□□□ 0.17
SDF4-207ENST00000494748 QARSP47897 775 aaKnown RBP16.14■□□□□ 0.17
SDF4-207ENST00000494748 GDF10P55107 478 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 OGDHQ02218 1023 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 THOC5Q13769 683 aaKnown RBP16.14■□□□□ 0.17
SDF4-207ENST00000494748 TREML1Q86YW5 311 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 VCPIP1Q96JH7 1222 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 SERAC1Q96JX3 654 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 PHACTR1Q9C0D0 580 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 NMUR2Q9GZQ4 415 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 DEFB129Q9H1M3 183 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 MTO1Q9Y2Z2 717 aaKnown RBP16.14■□□□□ 0.17
SDF4-207ENST00000494748 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.14■□□□□ 0.17
SDF4-207ENST00000494748 THSD7AQ9UPZ6 1657 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 PTPRJQ12913 1337 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 C3orf70A6NLC5 250 aaPredicted RBP16.14■□□□□ 0.17
SDF4-207ENST00000494748 PSMC4P43686 418 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 HIF1AQ16665 826 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 GSTA3Q16772 222 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 SPOPLQ6IQ16 392 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 ABRAQ8N0Z2 381 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 AGO4Q9HCK5 861 aaKnown RBP16.14■□□□□ 0.17
SDF4-207ENST00000494748 SYNPO2Q9UMS6 1093 aa16.14■□□□□ 0.17
SDF4-207ENST00000494748 TCRBV7S3A2A0A539 114 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 A8MXQ7 604 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 NBPF20Q3BBV1 942 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 PLA2G4FQ68DD2 849 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 FEZF2Q8TBJ5 459 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 HAUS1Q96CS2 278 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 BICD1Q96G01 975 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 OXNAD1Q96HP4 312 aaPredicted RBP16.13■□□□□ 0.17
SDF4-207ENST00000494748 ARMCX1Q9P291 453 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 ZNRF3Q9ULT6 936 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 DOCK5Q9H7D0 1870 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 SPDYE2BA6NHP3 402 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 FCHO1O14526 889 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 LYNP07948 512 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 SPDYE6P0CI01 402 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 ATF7P17544 494 aaPredicted RBP16.13■□□□□ 0.17
SDF4-207ENST00000494748 CDKN2BP42772 138 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 HSD17B4P51659 736 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 SPDYE2Q495Y8 402 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 ALYREFQ86V81 257 aaKnown RBP16.13■□□□□ 0.17
SDF4-207ENST00000494748 ACSF2Q96CM8 615 aaPredicted RBP16.13■□□□□ 0.17
SDF4-207ENST00000494748 DDX50Q9BQ39 737 aaKnown RBP16.13■□□□□ 0.17
SDF4-207ENST00000494748 TRIM4Q9C037 500 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 APOBEC3GQ9HC16 384 aaKnown RBP16.13■□□□□ 0.17
SDF4-207ENST00000494748 STK32BQ9NY57 414 aa16.13■□□□□ 0.17
SDF4-207ENST00000494748 GOLGB1Q14789 3259 aaKnown RBP16.13■□□□□ 0.17
SDF4-207ENST00000494748 TMEM191CA6NGB0 347 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 MAGEC1O60732 1142 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 VNN1O95497 513 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 TMEM191BP0C7N4 346 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 POLE2P56282 527 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 FAM182BQ5T319 152 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 MYLK4Q86YV6 388 aaPredicted RBP16.12■□□□□ 0.17
SDF4-207ENST00000494748 SCYL3Q8IZE3 742 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 RBM41Q96IZ5 413 aaKnown RBP16.12■□□□□ 0.17
SDF4-207ENST00000494748 PANX3Q96QZ0 392 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 NR1H4Q96RI1 486 aaPredicted RBP16.12■□□□□ 0.17
SDF4-207ENST00000494748 EPAS1Q99814 870 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 ZC3H12CQ9C0D7 883 aaKnown RBP16.12■□□□□ 0.17
SDF4-207ENST00000494748 FAM192AQ9GZU8 254 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 C10orf88Q9H8K7 445 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 MRPL47Q9HD33 250 aaKnown RBP16.12■□□□□ 0.17
SDF4-207ENST00000494748 POLIQ9UNA4 740 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.12■□□□□ 0.17
SDF4-207ENST00000494748 KRT1P04264 644 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 BGNP21810 368 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 SLC18A2Q05940 514 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 ENPEPQ07075 957 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 MCL1Q07820 350 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 TAS1R3Q7RTX0 852 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 TUBGCP5Q96RT8 1024 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 SENP7Q9BQF6 1050 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 MRIQ9BWK5 157 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 C1orf112Q9NSG2 853 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 ZBTB21Q9ULJ3 1066 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 STRIP2Q9ULQ0 834 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 FAM237BA0A1B0GVD1 139 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 MAP3K7O43318 606 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 TMEM63AO94886 807 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms