RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 AFF4Q9UHB7 1163 aaKnown RBP11.88□□□□□ -0.51
APTX-230ENST00000494649 INSL5Q9Y5Q6 135 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 TACC1O75410 805 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 PCSK1P29120 753 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 MCCD1P59942 119 aaPredicted RBP11.87□□□□□ -0.51
APTX-230ENST00000494649 CETN1Q12798 172 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 MAN2A1Q16706 1144 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 VWA3BQ502W6 1294 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 CT47A1Q5JQC4 288 aaPredicted RBP11.87□□□□□ -0.51
APTX-230ENST00000494649 CDKAL1Q5VV42 579 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 CES5AQ6NT32 575 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 GRASPQ7Z6J2 395 aaPredicted RBP11.87□□□□□ -0.51
APTX-230ENST00000494649 LMO3Q8TAP4 145 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 GIPC2Q8TF65 315 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 TAF4BQ92750 862 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 ZNF707Q96C28 371 aaPredicted RBP11.87□□□□□ -0.51
APTX-230ENST00000494649 PCED1BQ96HM7 432 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 POMKQ9H5K3 350 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 CBX8Q9HC52 389 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 DZANK1Q9NVP4 752 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 COQ4Q9Y3A0 265 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 YIPF1Q9Y548 306 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 DOCK6Q96HP0 2047 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 FSD2A1L4K1 749 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 BECN2A8MW95 431 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 N4BP1O75113 896 aaKnown RBP11.87□□□□□ -0.51
APTX-230ENST00000494649 LRG1P02750 347 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 CCDC130P13994 396 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 BDNFP23560 247 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 KLK7P49862 253 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 CBX2Q14781 532 aaPredicted RBP11.87□□□□□ -0.51
APTX-230ENST00000494649 DDR2Q16832 855 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 TPGS2Q68CL5 300 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 SPATA2LQ8IUW3 424 aaPredicted RBP11.87□□□□□ -0.51
APTX-230ENST00000494649 GPIHBP1Q8IV16 184 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 SCN4BQ8IWT1 228 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 DCP1BQ8IZD4 617 aaKnown RBP11.87□□□□□ -0.51
APTX-230ENST00000494649 B3GALNT2Q8NCR0 500 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 RPGRIP1Q96KN7 1286 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 NT5C1BQ96P26 610 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 PKMYT1Q99640 499 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 BCO2Q9BYV7 579 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 ADAM7Q9H2U9 754 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 CISHQ9NSE2 258 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 CDH9Q9ULB4 789 aa11.87□□□□□ -0.51
APTX-230ENST00000494649 HOXB8P17481 243 aaPredicted RBP11.86□□□□□ -0.51
APTX-230ENST00000494649 PTPN1P18031 435 aaKnown RBP11.86□□□□□ -0.51
APTX-230ENST00000494649 EEF1GP26641 437 aaKnown RBP11.86□□□□□ -0.51
APTX-230ENST00000494649 SSTR3P32745 418 aaPredicted RBP11.86□□□□□ -0.51
APTX-230ENST00000494649 CACNA2D1P54289 1103 aa11.86□□□□□ -0.51
APTX-230ENST00000494649 SMAD4Q13485 552 aaKnown RBP11.86□□□□□ -0.51
APTX-230ENST00000494649 CUL2Q13617 745 aa11.86□□□□□ -0.51
APTX-230ENST00000494649 PHLDB3Q6NSJ2 640 aa11.86□□□□□ -0.51
APTX-230ENST00000494649 CCDC149Q6ZUS6 474 aa11.86□□□□□ -0.51
APTX-230ENST00000494649 RNF214Q8ND24 703 aa11.86□□□□□ -0.51
APTX-230ENST00000494649 EHBP1Q8NDI1 1231 aa11.86□□□□□ -0.51
APTX-230ENST00000494649 FAM200AQ8TCP9 573 aa11.86□□□□□ -0.51
APTX-230ENST00000494649 WHAMMQ8TF30 809 aa11.86□□□□□ -0.51
APTX-230ENST00000494649 ATXN2LQ8WWM7 1075 aaKnown RBP11.86□□□□□ -0.51
APTX-230ENST00000494649 CORO1BQ9BR76 489 aa11.86□□□□□ -0.51
APTX-230ENST00000494649 PRKD2Q9BZL6 878 aa11.86□□□□□ -0.51
APTX-230ENST00000494649 ELOVL4Q9GZR5 314 aa11.86□□□□□ -0.51
APTX-230ENST00000494649 CEP72Q9P209 647 aa11.86□□□□□ -0.51
APTX-230ENST00000494649 PCDHB5Q9Y5E4 795 aa11.86□□□□□ -0.51
APTX-230ENST00000494649 C2orf16Q68DN1 1984 aa11.86□□□□□ -0.51
APTX-230ENST00000494649 NRG2O14511 850 aaPredicted RBP11.85□□□□□ -0.51
APTX-230ENST00000494649 GJA1P17302 382 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 ATF6P18850 670 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 ADORA2BP29275 332 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 MTMR3Q13615 1198 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 IQCB1Q15051 598 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 EXOC3L4Q17RC7 722 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 ATAT1Q5SQI0 421 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 TRIM65Q6PJ69 517 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 GPR149Q86SP6 731 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 TCEAL8Q8IYN2 117 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 HS6ST3Q8IZP7 471 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 ING5Q8WYH8 240 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 JAKMIP2Q96AA8 810 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 MED10Q9BTT4 135 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 ZNF518BQ9C0D4 1074 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 UBE2TQ9NPD8 197 aaPredicted RBP11.85□□□□□ -0.51
APTX-230ENST00000494649 TMEM30AQ9NV96 361 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 DNMT3BQ9UBC3 853 aaKnown RBP11.85□□□□□ -0.51
APTX-230ENST00000494649 DPP7Q9UHL4 492 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 AJAP1Q9UKB5 411 aaPredicted RBP11.85□□□□□ -0.51
APTX-230ENST00000494649 MAGED2Q9UNF1 606 aaPredicted RBP11.85□□□□□ -0.51
APTX-230ENST00000494649 MTCL1Q9Y4B5 1905 aaKnown RBP11.85□□□□□ -0.51
APTX-230ENST00000494649 FAM170AA1A519 330 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 CILPO75339 1184 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 PNMA6AP0CW24 399 aaPredicted RBP11.85□□□□□ -0.51
APTX-230ENST00000494649 BMP1P13497 986 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 ZNF18P17022 549 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 PON1P27169 355 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 ALDH1A3P47895 512 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 ITIH3Q06033 890 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 IFRD2Q12894 506 aaPredicted RBP11.85□□□□□ -0.51
APTX-230ENST00000494649 ARHGAP44Q17R89 818 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 AAK1Q2M2I8 961 aa11.85□□□□□ -0.51
APTX-230ENST00000494649 FAM171BQ6P995 826 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms