RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 TRIP11Q15643 1979 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 CCDC66A2RUB6 948 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 KBTBD13C9JR72 458 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 TMEM189-UBE2V1I3L0A0 370 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 M0QZQ0 153 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 TLR3O15455 904 aaKnown RBP7.2□□□□□ -1.26
MSH5-217ENST00000494458 MICAL2O94851 1124 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 PARNO95453 639 aaKnown RBP7.2□□□□□ -1.26
MSH5-217ENST00000494458 CTSHP09668 335 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 GHRP10912 638 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 FGFR1P11362 822 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 SELPP16109 830 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 CD58P19256 250 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 COMTP21964 271 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 SCNN1AP37088 669 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 RAP1GAPP47736 663 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 AFF1P51825 1210 aaKnown RBP7.2□□□□□ -1.26
MSH5-217ENST00000494458 TNNC1P63316 161 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 LSM11P83369 360 aaKnown RBP eCLIP7.2□□□□□ -1.26
MSH5-217ENST00000494458 DSC1Q08554 894 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 NFX1Q12986 1120 aaKnown RBP7.2□□□□□ -1.26
MSH5-217ENST00000494458 PAK2Q13177 524 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 ACAP1Q15027 740 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 MTFR1Q15390 333 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 CLUL1Q15846 466 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 SV2CQ496J9 727 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 PTPN20Q4JDL3 420 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 GLE1Q53GS7 698 aaKnown RBP7.2□□□□□ -1.26
MSH5-217ENST00000494458 SGO2Q562F6 1265 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 PLEKHG4Q58EX7 1191 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 LIN9Q5TKA1 542 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 MMS22LQ6ZRQ5 1243 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 SLC24A5Q71RS6 500 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 XYLT1Q86Y38 959 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 TMEM86AQ8N2M4 240 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 ANKRD52Q8NB46 1076 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 SH3TC2Q8TF17 1288 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 SEC14L1Q92503 715 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 TSC1Q92574 1164 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 ALG3Q92685 438 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 GOLGA1Q92805 767 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 KHSRPQ92945 711 aaKnown RBP eCLIP7.2□□□□□ -1.26
MSH5-217ENST00000494458 PGBD4Q96DM1 585 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 VWCEQ96DN2 955 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 UROC1Q96N76 676 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 GAD1Q99259 594 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 HNRNPABQ99729 332 aaKnown RBP7.2□□□□□ -1.26
MSH5-217ENST00000494458 ADAM2Q99965 735 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.2□□□□□ -1.265e-6■■■□□ 16.3
MSH5-217ENST00000494458 UBXN6Q9BZV1 441 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 GOLPH3Q9H4A6 298 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 SEPT11Q9NVA2 429 aaKnown RBP7.2□□□□□ -1.26
MSH5-217ENST00000494458 KLK14Q9P0G3 267 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 STRIP2Q9ULQ0 834 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 L1RE1Q9UN81 338 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 SNX9Q9Y5X1 595 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 SCINQ9Y6U3 715 aa7.2□□□□□ -1.26
MSH5-217ENST00000494458 CENPFP49454 3210 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 MYO1FO00160 1098 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 ENPP3O14638 875 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 FSCN2O14926 492 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 NBNO60934 754 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 EFEMP2O95967 443 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 CCL5P13501 91 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 IGFBP6P24592 240 aaPredicted RBP7.19□□□□□ -1.26
MSH5-217ENST00000494458 LMO2P25791 158 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 GNL1P36915 607 aaPredicted RBP7.19□□□□□ -1.26
MSH5-217ENST00000494458 NAP1L1P55209 391 aaKnown RBP7.19□□□□□ -1.26
MSH5-217ENST00000494458 ZNF252P-AS1Q0IIN9 211 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 GRIK3Q13003 919 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 PDCLQ13371 301 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 TUSC3Q13454 348 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 BFSP2Q13515 415 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 ELF2Q15723 593 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 TAZQ16635 292 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 CYP1B1Q16678 543 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 ZNF394Q53GI3 561 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 GLRA4Q5JXX5 417 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 PPP1R26Q5T8A7 1209 aaPredicted RBP7.19□□□□□ -1.26
MSH5-217ENST00000494458 FAM171BQ6P995 826 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 SLC39A5Q6ZMH5 540 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 SCARA5Q6ZMJ2 495 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 PAQR9Q6ZVX9 377 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 OSTM1Q86WC4 334 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 TTC30AQ86WT1 665 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 ERICH1Q86X53 443 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 ZDHHC14Q8IZN3 488 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 PDCL2Q8N4E4 241 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 ARFGAP1Q8N6T3 406 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 EIF1ADQ8N9N8 165 aaKnown RBP7.19□□□□□ -1.26
MSH5-217ENST00000494458 ANKLE1Q8NAG6 615 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 C1orf131Q8NDD1 294 aaKnown RBP7.19□□□□□ -1.26
MSH5-217ENST00000494458 C3orf58Q8NDZ4 430 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 APPL2Q8NEU8 664 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 C18orf8Q96DM3 657 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 MS4A14Q96JA4 679 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 ZNF333Q96JL9 665 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 HEXIM2Q96MH2 286 aaKnown RBP7.19□□□□□ -1.26
MSH5-217ENST00000494458 CPXM1Q96SM3 734 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 PKMYT1Q99640 499 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms