RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 HRKO00198 91 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 BRINP1O60477 761 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 NBNO60934 754 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 F2P00734 622 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 GH1P01241 217 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 MMP3P08254 477 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 HSPD1P10809 573 aaKnown RBP5.97□□□□□ -1.45
PTCD3-219ENST00000494323 COL6A2P12110 1019 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 CKBP12277 381 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 CPEP16870 476 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 CASTP20810 708 aaKnown RBP5.97□□□□□ -1.45
PTCD3-219ENST00000494323 EDNRBP24530 442 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 MAPKAPK2P49137 400 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 MRPL12P52815 198 aaKnown RBP5.97□□□□□ -1.45
PTCD3-219ENST00000494323 WDR5P61964 334 aaKnown RBP5.97□□□□□ -1.45
PTCD3-219ENST00000494323 SLC9A5Q14940 896 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 PWP2Q15269 919 aaKnown RBP5.97□□□□□ -1.45
PTCD3-219ENST00000494323 STXBP2Q15833 593 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 MCMDC2Q4G0Z9 681 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 TMEM31Q5JXX7 168 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 ZNF618Q5T7W0 954 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 CREB3L3Q68CJ9 461 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 OVCH1Q7RTY7 1134 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 SPATS2Q86XZ4 545 aaKnown RBP5.97□□□□□ -1.45
PTCD3-219ENST00000494323 CISD2Q8N5K1 135 aaKnown RBP5.97□□□□□ -1.45
PTCD3-219ENST00000494323 C7orf31Q8N865 590 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 CHST14Q8NCH0 376 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 DNERQ8NFT8 737 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 OR2W6PQ8NHA6 318 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 UHMK1Q8TAS1 419 aaKnown RBP5.97□□□□□ -1.45
PTCD3-219ENST00000494323 PHOSPHO1Q8TCT1 267 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 EVI5LQ96CN4 794 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 TTC14Q96N46 770 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 SMOC1Q9H4F8 434 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 IFT22Q9H7X7 185 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 COL20A1Q9P218 1284 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 DSEQ9UL01 958 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 BAZ2BQ9UIF8 2168 aaKnown RBP5.97□□□□□ -1.45
PTCD3-219ENST00000494323 PTPRSQ13332 1948 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-219ENST00000494323 ABHD14A-ACY1A0A1B0GW23 586 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 ZC3H12DA2A288 527 aaKnown RBP5.96□□□□□ -1.46
PTCD3-219ENST00000494323 LINC01553A4QN01 128 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 NUDT19A8MXV4 375 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 DHX16O60231 1041 aaKnown RBP5.96□□□□□ -1.46
PTCD3-219ENST00000494323 TADA3O75528 432 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 BAIAP3O94812 1187 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 GJB5O95377 273 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 ZNF286BP0CG31 522 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 SNHG28P0DPA3 235 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 MYCLP12524 364 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-219ENST00000494323 KCNA5P22460 613 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 PDE1AP54750 535 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 YBX1P67809 324 aaKnown RBP5.96□□□□□ -1.46
PTCD3-219ENST00000494323 ARHGAP1Q07960 439 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 DGKDQ16760 1214 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 KIAA0753Q2KHM9 967 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 ARHGEF16Q5VV41 709 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 RNF219Q5W0B1 726 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-219ENST00000494323 CNKSR3Q6P9H4 555 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 RPTNQ6XPR3 784 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.96□□□□□ -1.46
PTCD3-219ENST00000494323 ARHGAP36Q6ZRI8 547 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 EP400NLQ6ZTU2 488 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 LRRC8DQ7L1W4 858 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 ZNF589Q86UQ0 364 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-219ENST00000494323 OSTM1Q86WC4 334 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 TRIM48Q8IWZ4 208 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 ADGRF4Q8IZF3 695 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 NLGN4XQ8N0W4 816 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 NXPE1Q8N323 547 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 CAGE1Q8TC20 777 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 NSUN6Q8TEA1 469 aaKnown RBP5.96□□□□□ -1.46
PTCD3-219ENST00000494323 AFAP1L1Q8TED9 768 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 COG1Q8WTW3 980 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 RILPL2Q969X0 211 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 TSPAN17Q96FV3 270 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 TGS1Q96RS0 853 aaKnown RBP5.96□□□□□ -1.46
PTCD3-219ENST00000494323 CEP89Q96ST8 783 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 RMDN3Q96TC7 470 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 TTC1Q99614 292 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 RAD9AQ99638 391 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 C17orf80Q9BSJ5 609 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 BCAS3Q9H6U6 928 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 B4GALT6Q9UBX8 382 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 APOBEC2Q9Y235 224 aaKnown RBP5.96□□□□□ -1.46
PTCD3-219ENST00000494323 PCDHB4Q9Y5E5 795 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 LRRC37A2A6NM11 1700 aa5.96□□□□□ -1.46
PTCD3-219ENST00000494323 PIEZO1Q92508 2521 aa5.95□□□□□ -1.46
PTCD3-219ENST00000494323 PI4K2BG5E9Z4 385 aa5.95□□□□□ -1.46
PTCD3-219ENST00000494323 H3BQ06 376 aaPredicted RBP5.95□□□□□ -1.46
PTCD3-219ENST00000494323 SGSM2O43147 1006 aa5.95□□□□□ -1.46
PTCD3-219ENST00000494323 EIF3JO75822 258 aaKnown RBP5.95□□□□□ -1.46
PTCD3-219ENST00000494323 CFBP00751 764 aa5.95□□□□□ -1.46
PTCD3-219ENST00000494323 CXCL10P02778 98 aa5.95□□□□□ -1.46
PTCD3-219ENST00000494323 TMEM253P0C7T8 217 aa5.95□□□□□ -1.46
PTCD3-219ENST00000494323 IL9P15248 144 aa5.95□□□□□ -1.46
PTCD3-219ENST00000494323 KRT15P19012 456 aa5.95□□□□□ -1.46
PTCD3-219ENST00000494323 SDHBP21912 280 aa5.95□□□□□ -1.46
PTCD3-219ENST00000494323 HOXA13P31271 388 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms