RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 CEP112Q8N8E3 955 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 BEST2Q8NFU1 509 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 CTNNBL1Q8WYA6 563 aaPredicted RBP7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 GLT1D1Q96MS3 346 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 KREMEN1Q96MU8 473 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 RYDENQ9NUL5 291 aaKnown RBP7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 NOVA2Q9UNW9 492 aaKnown RBP7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 LACTBL1A8MY62 500 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 PGK1P00558 417 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 CYP1A2P05177 515 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 GRK4P32298 578 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 SSTR3P32745 418 aaPredicted RBP7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 PNPLA4P41247 253 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 TNFSF9P41273 254 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 CYP27A1Q02318 531 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 APBA1Q02410 837 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 SFSWAPQ12872 951 aaKnown RBP7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 MYO1EQ12965 1108 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 SERINC3Q13530 473 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 CLUL1Q15846 466 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 ZNF699Q32M78 642 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 ZNF667Q5HYK9 610 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 RUFY4Q6ZNE9 571 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 SLC35F6Q8N357 371 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 LRRC52Q8N7C0 313 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 MNS1Q8NEH6 495 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 VCPIP1Q96JH7 1222 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 AGAP3Q96P47 875 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 OSMRQ99650 979 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 AP1M1Q9BXS5 423 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 TGIF2Q9GZN2 237 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 ISCUQ9H1K1 167 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 ALG2Q9H553 416 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 TMEM165Q9HC07 324 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 CDC23Q9UJX2 597 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 AJAP1Q9UKB5 411 aaPredicted RBP7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 KIAA1257Q9ULG3 409 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 ATP8A1Q9Y2Q0 1164 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 PCDHGA4Q9Y5G9 962 aa7.12□□□□□ -1.27
FNDC3B-212ENST00000494000 ANK1P16157 1881 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 NCANO14594 1321 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 TTLL13PA6NNM8 815 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 PRRT4C9JH25 899 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 DDX3XO00571 662 aaKnown RBP eCLIP7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 CES2O00748 559 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 MED7O43513 233 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 URI1O94763 535 aaPredicted RBP7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 NPTXRO95502 500 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 CXCL8P10145 99 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 KRT5P13647 590 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 CYP11B1P15538 503 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 TCP1P17987 556 aaKnown RBP7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 CCND3P30281 292 aaPredicted RBP7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 HOXA11P31270 313 aaPredicted RBP7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 USP8P40818 1118 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 CHMP4BP1P59074 171 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 LMNB2Q03252 620 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 CKAP4Q07065 602 aaKnown RBP7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 SLC10A6Q3KNW5 377 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 XKR4Q5GH76 650 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 ZBTB41Q5SVQ8 909 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 PAPD7Q5XG87 772 aaKnown RBP7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 CXCL17Q6UXB2 119 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 TAX1BP1Q86VP1 789 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 OR5B17Q8NGF7 314 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 GSDMBQ8TAX9 411 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 U2AF1L4Q8WU68 220 aaKnown RBP7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 TATDN2Q93075 761 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 LENG1Q96BZ8 264 aaPredicted RBP7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 ASIC4Q96FT7 647 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 TRMT2BQ96GJ1 504 aaKnown RBP7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 CPB2Q96IY4 423 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 ZNF518BQ9C0D4 1074 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 MTMR12Q9C0I1 747 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 UBN1Q9NPG3 1134 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 UTP6Q9NYH9 597 aaKnown RBP7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 EIF2B4Q9UI10 523 aaKnown RBP7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 GTF3C4Q9UKN8 822 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 UBQLN1Q9UMX0 589 aaKnown RBP7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 PCDHGC5Q9Y5F6 944 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 MYADML2A6NDP7 307 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 KBTBD13C9JR72 458 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 AKAP10O43572 662 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 LRRN2O75325 713 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 RPS6KA5O75582 802 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 TIPRLO75663 272 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 LSM8O95777 96 aaKnown RBP7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 INHAP05111 366 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 TUBBP07437 444 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 PAEPP09466 180 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 KCNE1P15382 129 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 ELNP15502 786 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 PPM1FP49593 454 aaPredicted RBP7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 ACLYP53396 1101 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 ITGA7Q13683 1181 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 STILQ15468 1287 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 PLEKHG4Q58EX7 1191 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 FAM47CQ5HY64 1035 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 PDCL2Q8N4E4 241 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 RFFLQ8WZ73 363 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms