RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 CDK5RAP3Q96JB5 506 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 ZSWIM3Q96MP5 696 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 TIPINQ9BVW5 301 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 CARD6Q9BX69 1037 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 SLC2A4RGQ9NR83 387 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 TOPORSQ9NS56 1045 aaPredicted RBP8.78□□□□□ -1
HDAC6-234ENST00000493923 SPATS2LQ9NUQ6 558 aaKnown RBP8.78□□□□□ -1
HDAC6-234ENST00000493923 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.78□□□□□ -1
HDAC6-234ENST00000493923 WNT16Q9UBV4 365 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 DPP7Q9UHL4 492 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 MCM8Q9UJA3 840 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 RAB21Q9UL25 225 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 A0A0B4J269 797 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 PRR23AA6NEV1 266 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 MYMKA6NI61 221 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 PROB1E7EW31 1015 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 M0QZQ0 153 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 STK25O00506 426 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 SYN3O14994 580 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 CLDN3O15551 220 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 XYLBO75191 536 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 SOAT2O75908 522 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 KIAA0754O94854 1291 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 SEC31AO94979 1220 aaKnown RBP8.77□□□□□ -1.01
HDAC6-234ENST00000493923 FAM13AO94988 1023 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 NFICP08651 508 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 POU2F2P09086 479 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 CLTAP09496 248 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 ADSSP30520 456 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 LRPAP1P30533 357 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 RPL9P32969 192 aaKnown RBP8.77□□□□□ -1.01
HDAC6-234ENST00000493923 LONP1P36776 959 aaKnown RBP8.77□□□□□ -1.01
HDAC6-234ENST00000493923 UBA7P41226 1012 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 MATR3P43243 847 aaKnown RBP eCLIP8.77□□□□□ -1.01
HDAC6-234ENST00000493923 AARSP49588 968 aaKnown RBP eCLIP8.77□□□□□ -1.01
HDAC6-234ENST00000493923 ACOT2P49753 483 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 SMTNP53814 917 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 RWDD2BP57060 319 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 ADCY2Q08462 1091 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 ADCY1Q08828 1119 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 RBBP5Q15291 538 aaKnown RBP8.77□□□□□ -1.01
HDAC6-234ENST00000493923 ANGPT1Q15389 498 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 PDCD2Q16342 344 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-234ENST00000493923 PDXDC1Q6P996 788 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 ELMSAN1Q6PJG2 1045 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 CRELD2Q6UXH1 353 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-234ENST00000493923 DYMQ7RTS9 669 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 APBB1IPQ7Z5R6 666 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-234ENST00000493923 SFR1Q86XK3 245 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 GPIHBP1Q8IV16 184 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 TCEAL8Q8IYN2 117 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 MAML2Q8IZL2 1156 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-234ENST00000493923 MSANTD4Q8NCY6 345 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 ZNF461Q8TAF7 563 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 MAGEC3Q8TD91 643 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 LARP4BQ92615 738 aaKnown RBP8.77□□□□□ -1.01
HDAC6-234ENST00000493923 KCNN1Q92952 543 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 DNAJC19Q96DA6 116 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 RSPRY1Q96DX4 576 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 BICD1Q96G01 975 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 CCDC34Q96HJ3 373 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 SPATA32Q96LK8 384 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 AK8Q96MA6 479 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 USP28Q96RU2 1077 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 PRRX2Q99811 253 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 CORO1BQ9BR76 489 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 LRRC3Q9BY71 257 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 NUCKS1Q9H1E3 243 aaKnown RBP8.77□□□□□ -1.01
HDAC6-234ENST00000493923 DNAJC25Q9H1X3 360 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 ZHX3Q9H4I2 956 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 CYP4F11Q9HBI6 524 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 BATF3Q9NR55 127 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 ARHGEF3Q9NR81 526 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 SLC38A7Q9NVC3 462 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 TBC1D7Q9P0N9 293 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 CPSF3Q9UKF6 684 aaKnown RBP8.77□□□□□ -1.01
HDAC6-234ENST00000493923 CFAP45Q9UL16 551 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 ODF2LQ9ULJ1 636 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 MRPS23Q9Y3D9 190 aaKnown RBP8.77□□□□□ -1.01
HDAC6-234ENST00000493923 NUB1Q9Y5A7 615 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 INSL5Q9Y5Q6 135 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 PATJQ8NI35 1801 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 CACNA1AO00555 2505 aa8.77□□□□□ -1.01
HDAC6-234ENST00000493923 TICRRQ7Z2Z1 1910 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 SDK1Q7Z5N4 2213 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 PRRG1O14668 218 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 HNRNPDLO14979 420 aaKnown RBP8.76□□□□□ -1.01
HDAC6-234ENST00000493923 OGTO15294 1046 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 TRAPPC3O43617 180 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 PPP1R37O75864 691 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 ATF2P15336 505 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 VIPR2P41587 438 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 LIG4P49917 911 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 CASP5P51878 434 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 SLC8A3P57103 927 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 GTF2BQ00403 316 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 TWF1Q12792 350 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 GRM2Q14416 872 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 SLMAPQ14BN4 828 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 FAM78AQ5JUQ0 283 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms