RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 NLRP11P59045 1033 aaKnown RBP12.23□□□□□ -0.45
BRCA1-222ENST00000493919 KRT83P78385 493 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 MGAT3Q09327 533 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 RIPK1Q13546 671 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 PSRC1Q6PGN9 363 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-222ENST00000493919 DBX2Q6ZNG2 339 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 OTOP2Q7RTS6 562 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 LINC01465Q8N7H1 131 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 NLRP7Q8WX94 980 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 SCG3Q8WXD2 468 aaKnown RBP12.23□□□□□ -0.45
BRCA1-222ENST00000493919 NELL1Q92832 810 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 CCDC42Q96M95 316 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 NLRP4Q96MN2 994 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 OSBPL7Q9BZF2 842 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 FAM204AQ9H8W3 233 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 GDPD2Q9HCC8 539 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 POLMQ9NP87 494 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-222ENST00000493919 ZNF180Q9UJW8 692 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 DBR1Q9UK59 544 aaKnown RBP12.23□□□□□ -0.45
BRCA1-222ENST00000493919 COLQQ9Y215 455 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-222ENST00000493919 USTQ9Y2C2 406 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 TRIOBPQ9H2D6 2365 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 TRIM64A6NGJ6 449 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 TRIM64BA6NI03 449 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 RASA4O43374 803 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 TACC1O75410 805 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 APOEP02649 317 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 PFKMP08237 780 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 PRKACBP22694 351 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 E2F2Q14209 437 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 TMEM119Q4V9L6 283 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 WDR44Q5JSH3 913 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 FCRLBQ6BAA4 426 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 PADI6Q6TGC4 694 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 KSR1Q8IVT5 923 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 PSPC1Q8WXF1 523 aaKnown RBP12.23□□□□□ -0.45
BRCA1-222ENST00000493919 ITPKCQ96DU7 683 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 NRBF2Q96F24 287 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 SRPK1Q96SB4 655 aaKnown RBP12.23□□□□□ -0.45
BRCA1-222ENST00000493919 OSBPL1AQ9BXW6 950 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 CELF4Q9BZC1 486 aaKnown RBP12.23□□□□□ -0.45
BRCA1-222ENST00000493919 NAT10Q9H0A0 1025 aaKnown RBP12.23□□□□□ -0.45
BRCA1-222ENST00000493919 TPK1Q9H3S4 243 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 CLSTN2Q9H4D0 955 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 VIPAS39Q9H9C1 493 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 CD93Q9NPY3 652 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 XPNPEP1Q9NQW7 623 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 SEPT11Q9NVA2 429 aaKnown RBP12.23□□□□□ -0.45
BRCA1-222ENST00000493919 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.23□□□□□ -0.45
BRCA1-222ENST00000493919 RHBDL2Q9NX52 303 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 NDUFA13Q9P0J0 144 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 TCHHQ07283 1943 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 CDH23Q9H251 3354 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 IGKV6-21A0A0C4DH24 114 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 PRSS47A8MTI9 375 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 GAS2O43903 313 aaKnown RBP12.22□□□□□ -0.45
BRCA1-222ENST00000493919 EYA4O95677 639 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 OLFM2O95897 454 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 ANXA13P27216 316 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 VASPP50552 380 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-222ENST00000493919 GPNMBQ14956 572 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 SHHQ15465 462 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 ANKRD39Q53RE8 183 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 CEP78Q5JTW2 689 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 FAM26DQ5JW98 314 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 FBXO47Q5MNV8 452 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 HYIQ5T013 277 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 ZNF362Q5T0B9 420 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-222ENST00000493919 FAM102BQ5T8I3 360 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 CORO6Q6QEF8 472 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 C16orf59Q7L2K0 433 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 CCDC13Q8IYE1 715 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 TDHQ8IZJ6 230 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 SAMD11Q96NU1 681 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 NUP58Q9BVL2 599 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 PLVAPQ9BX97 442 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 IFIH1Q9BYX4 1025 aaKnown RBP12.22□□□□□ -0.45
BRCA1-222ENST00000493919 POLR3FQ9H1D9 316 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-222ENST00000493919 GPRC5CQ9NQ84 441 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 ZC3H7BQ9UGR2 993 aaKnown RBP12.22□□□□□ -0.45
BRCA1-222ENST00000493919 COL4A3BPQ9Y5P4 624 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 SZT2Q5T011 3432 aa12.22□□□□□ -0.45
BRCA1-222ENST00000493919 AKR1B15C9JRZ8 316 aaPredicted RBP12.21□□□□□ -0.45
BRCA1-222ENST00000493919 AP3B1O00203 1094 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 NVLO15381 856 aaKnown RBP12.21□□□□□ -0.45
BRCA1-222ENST00000493919 CUTAO60888 179 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 MAP3K6O95382 1288 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 FGBP02675 491 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 GSTA2P09210 222 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 VARSP26640 1264 aaKnown RBP12.21□□□□□ -0.45
BRCA1-222ENST00000493919 CASP2P42575 452 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 AARSP49588 968 aaKnown RBP eCLIP12.21□□□□□ -0.45
BRCA1-222ENST00000493919 GBE1Q04446 702 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 MTMR3Q13615 1198 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 RAPGEF1Q13905 1077 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 NFE2L1Q14494 772 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 LPIN1Q14693 890 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 INSCQ1MX18 579 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 ANKDD1AQ495B1 522 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 TMEM240Q5SV17 173 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms