RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 PAPPA2Q9BXP8 1791 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 TMEM120BA0PK00 339 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 UNCXA6NJT0 531 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 C22orf31O95567 290 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 GH1P01241 217 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 PGK2P07205 417 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 VDRP11473 427 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 TSHRP16473 764 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 PHBP35232 272 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 GABRB2P47870 512 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 VPS41P49754 854 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 PSMC1P62191 440 aaKnown RBP10.16□□□□□ -0.78
NPHP3-209ENST00000493732 CDC42EP1Q00587 391 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 ZNF252P-AS1Q0IIN9 211 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 R3HDM1Q15032 1099 aaKnown RBP10.16□□□□□ -0.78
NPHP3-209ENST00000493732 OASLQ15646 514 aaKnown RBP10.16□□□□□ -0.78
NPHP3-209ENST00000493732 QPCTQ16769 361 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 WDR72Q3MJ13 1102 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 KAZNQ674X7 775 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 BBS12Q6ZW61 710 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 PACS2Q86VP3 889 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 WDTC1Q8N5D0 677 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 SLC35B2Q8TB61 432 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 TFAP2BQ92481 460 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 TMEM176AQ96HP8 235 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 FGD4Q96M96 766 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 LRRC4CQ9HCJ2 640 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 VTA1Q9NP79 307 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 ASNSD1Q9NWL6 643 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 SLC24A2Q9UI40 661 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 ITGA11Q9UKX5 1188 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 C2CD2Q9Y426 696 aa10.16□□□□□ -0.78
NPHP3-209ENST00000493732 CCT8L1PA6NM43 557 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 PI4K2BG5E9Z4 385 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 O00370 1275 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 ALOX15BO15296 676 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 STAG3L1P0CL83 205 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 KRT10P13645 584 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 BRAFP15056 766 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 PCK1P35558 622 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 RAD23BP54727 409 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 PTPN11Q06124 597 aaPredicted RBP10.15□□□□□ -0.78
NPHP3-209ENST00000493732 GPS1Q13098 491 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 TTLL12Q14166 644 aaPredicted RBP10.15□□□□□ -0.78
NPHP3-209ENST00000493732 TAZQ16635 292 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 ANKRD20A8PQ5CZ79 823 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 USP50Q70EL3 339 aaPredicted RBP10.15□□□□□ -0.78
NPHP3-209ENST00000493732 TRIM50Q86XT4 487 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 SUGP1Q8IWZ8 645 aaKnown RBP10.15□□□□□ -0.78
NPHP3-209ENST00000493732 LRRC34Q8IZ02 419 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 CCT6BQ92526 530 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 EMID1Q96A84 441 aaPredicted RBP10.15□□□□□ -0.78
NPHP3-209ENST00000493732 ADPGKQ9BRR6 497 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 DNAI2Q9GZS0 605 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 RSAD1Q9HA92 442 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 KCNK9Q9NPC2 374 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 NAALADL1Q9UQQ1 740 aa10.15□□□□□ -0.78
NPHP3-209ENST00000493732 EXOC1LA0A1B0GW35 172 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 ADM5C9JUS6 153 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 SGK1O00141 431 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 CILPO75339 1184 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 CAPN15O75808 1086 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 DDNO94850 711 aaPredicted RBP10.15□□□□□ -0.79
NPHP3-209ENST00000493732 SUN1O94901 812 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 CXCL8P10145 99 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 STIP1P31948 543 aaKnown RBP10.15□□□□□ -0.79
NPHP3-209ENST00000493732 SSTR3P32745 418 aaPredicted RBP10.15□□□□□ -0.79
NPHP3-209ENST00000493732 RFC1P35251 1148 aaPredicted RBP10.15□□□□□ -0.79
NPHP3-209ENST00000493732 RBP5P82980 135 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 IL9RQ01113 521 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 OGDHQ02218 1023 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 MYO1EQ12965 1108 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 SNAPC2Q13487 334 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 TFDP2Q14188 446 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 KCTD19Q17RG1 926 aaPredicted RBP10.15□□□□□ -0.79
NPHP3-209ENST00000493732 PTPN20Q4JDL3 420 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 DAB2IPQ5VWQ8 1189 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 DENND1BQ6P3S1 775 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 SCARA5Q6ZMJ2 495 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 ZNF467Q7Z7K2 595 aaPredicted RBP10.15□□□□□ -0.79
NPHP3-209ENST00000493732 FBXO16Q8IX29 292 aaPredicted RBP10.15□□□□□ -0.79
NPHP3-209ENST00000493732 PPIL6Q8IXY8 311 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 CCDC13Q8IYE1 715 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 CKAP2Q8WWK9 683 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 MAGEB18Q96M61 343 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 SAYSD1Q9NPB0 183 aa10.15□□□□□ -0.79
NPHP3-209ENST00000493732 SMG5Q9UPR3 1016 aaKnown RBP10.15□□□□□ -0.79
NPHP3-209ENST00000493732 POLR2AP24928 1970 aaKnown RBP10.15□□□□□ -0.79
NPHP3-209ENST00000493732 OTOFQ9HC10 1997 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 LACTBL1A8MY62 500 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 GOLGA8SH3BPF8 625 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 STRNO43815 780 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 LRCH4O75427 683 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 INSRRP14616 1297 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 ATP2A2P16615 1042 aaKnown RBP10.14□□□□□ -0.79
NPHP3-209ENST00000493732 KDELR1P24390 212 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 STX2P32856 288 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 CLCN3P51790 818 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 ARL4CP56559 192 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 OSTNP61366 133 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms