RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 TRAF3IP3Q9Y228 551 aa13.13□□□□□ -0.31
UPF3A-210ENST00000493727 DYRK1BQ9Y463 629 aa13.13□□□□□ -0.31
UPF3A-210ENST00000493727 CACNA1IQ9P0X4 2223 aa13.13□□□□□ -0.31
UPF3A-210ENST00000493727 TISP43B9A030 160 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 ANKRD63C9JTQ0 380 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 N4BP3O15049 544 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 CLDN3O15551 220 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 EXOC3O60645 756 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 TOM1L1O75674 476 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 PIGRP01833 764 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 EDN1P05305 212 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 GLUD2P49448 558 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 SCNN1GP51170 649 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 AFF1P51825 1210 aaKnown RBP13.12□□□□□ -0.31
UPF3A-210ENST00000493727 CREMQ03060 361 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 GRIK3Q13003 919 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 ADAM9Q13443 819 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 ELOAQ14241 798 aaKnown RBP13.12□□□□□ -0.31
UPF3A-210ENST00000493727 NOLC1Q14978 699 aaKnown RBP eCLIP13.12□□□□□ -0.31
UPF3A-210ENST00000493727 IQCB1Q15051 598 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 LCE2AQ5TA79 106 aaPredicted RBP13.12□□□□□ -0.31
UPF3A-210ENST00000493727 CEP135Q66GS9 1140 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 SLC27A1Q6PCB7 646 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 TMC5Q6UXY8 1006 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 CREBRFQ8IUR6 639 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 FAM114A1Q8IWE2 563 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 CCDC105Q8IYK2 499 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 ANKRD20A12PQ8NF67 263 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 RPS6KC1Q96S38 1066 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 ACO2Q99798 780 aaKnown RBP13.12□□□□□ -0.31
UPF3A-210ENST00000493727 ADPGKQ9BRR6 497 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 CBWD1Q9BRT8 395 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 MSTO1Q9BUK6 570 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 SRRTQ9BXP5 876 aaKnown RBP13.12□□□□□ -0.31
UPF3A-210ENST00000493727 RBSNQ9H1K0 784 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 MFSD1Q9H3U5 465 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 PCIF1Q9H4Z3 704 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.12□□□□□ -0.31
UPF3A-210ENST00000493727 DUSP12Q9UNI6 340 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 FRMD4BQ9Y2L6 1034 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 PRG3Q9Y2Y8 225 aaPredicted RBP13.12□□□□□ -0.31
UPF3A-210ENST00000493727 EPG5Q9HCE0 2579 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 SPTBN2O15020 2390 aa13.12□□□□□ -0.31
UPF3A-210ENST00000493727 TRIP11Q15643 1979 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 A0A1B0GUA9 196 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 GOLGA6L3A6NEY3 463 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 PI15O43692 258 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 GLUD1P00367 558 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 EPB41P11171 864 aaKnown RBP13.11□□□□□ -0.31
UPF3A-210ENST00000493727 CDK11BP21127 795 aaKnown RBP13.11□□□□□ -0.31
UPF3A-210ENST00000493727 GARTP22102 1010 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 ID4P47928 161 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 DSG1Q02413 1049 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 CCDC40Q4G0X9 1142 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 HSP90AA4PQ58FG1 418 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 LCE2CQ5TA81 110 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 SLC39A4Q6P5W5 647 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 FOXR2Q6PJQ5 311 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 MPZL3Q6UWV2 235 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 CDR2LQ86X02 465 aaPredicted RBP13.11□□□□□ -0.31
UPF3A-210ENST00000493727 RNF168Q8IYW5 571 aaPredicted RBP13.11□□□□□ -0.31
UPF3A-210ENST00000493727 XXYLT1Q8NBI6 393 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 FLCNQ8NFG4 579 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 HDAC7Q8WUI4 952 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 EEF2KMTQ96G04 330 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 CEP63Q96MT8 703 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 DUSP9Q99956 384 aaKnown RBP13.11□□□□□ -0.31
UPF3A-210ENST00000493727 APOL6Q9BWW8 343 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 NXF3Q9H4D5 531 aaKnown RBP13.11□□□□□ -0.31
UPF3A-210ENST00000493727 THAP9Q9H5L6 903 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 PDZD7Q9H5P4 517 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 RXFP1Q9HBX9 757 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 TIMMDC1Q9NPL8 285 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 MARCH5Q9NX47 278 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 HSPBP1Q9NZL4 362 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 ZMIZ1Q9ULJ6 1067 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 NOVA2Q9UNW9 492 aaKnown RBP13.11□□□□□ -0.31
UPF3A-210ENST00000493727 TNFSF13BQ9Y275 285 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 HES2Q9Y543 173 aa13.11□□□□□ -0.31
UPF3A-210ENST00000493727 C2CD2LO14523 706 aa13.1□□□□□ -0.31
UPF3A-210ENST00000493727 KIAA0391O15091 583 aaKnown RBP13.1□□□□□ -0.31
UPF3A-210ENST00000493727 NPTXRO95502 500 aa13.1□□□□□ -0.31
UPF3A-210ENST00000493727 EFEMP2O95967 443 aa13.1□□□□□ -0.31
UPF3A-210ENST00000493727 MYBPC2Q14324 1141 aa13.1□□□□□ -0.31
UPF3A-210ENST00000493727 NCAPHQ15003 741 aa13.1□□□□□ -0.31
UPF3A-210ENST00000493727 NFIL3Q16649 462 aa13.1□□□□□ -0.31
UPF3A-210ENST00000493727 USP41Q3LFD5 358 aa13.1□□□□□ -0.31
UPF3A-210ENST00000493727 DCAF4L1Q3SXM0 396 aa13.1□□□□□ -0.31
UPF3A-210ENST00000493727 EEF1DP3Q658K8 133 aa13.1□□□□□ -0.31
UPF3A-210ENST00000493727 TREML4Q6UXN2 200 aa13.1□□□□□ -0.31
UPF3A-210ENST00000493727 SLC9A9Q8IVB4 645 aa13.1□□□□□ -0.31
UPF3A-210ENST00000493727 SAAL1Q96ER3 474 aa13.1□□□□□ -0.31
UPF3A-210ENST00000493727 ZBTB45Q96K62 511 aaPredicted RBP13.1□□□□□ -0.31
UPF3A-210ENST00000493727 CNOT6LQ96LI5 555 aaKnown RBP13.1□□□□□ -0.31
UPF3A-210ENST00000493727 MED15Q96RN5 788 aa13.1□□□□□ -0.31
UPF3A-210ENST00000493727 PLEKHA4Q9H4M7 779 aa13.1□□□□□ -0.31
UPF3A-210ENST00000493727 MAN1C1Q9NR34 630 aa13.1□□□□□ -0.31
UPF3A-210ENST00000493727 SAMSN1Q9NSI8 373 aaKnown RBP13.1□□□□□ -0.31
UPF3A-210ENST00000493727 FANCLQ9NW38 375 aa13.1□□□□□ -0.31
UPF3A-210ENST00000493727 AGO2Q9UKV8 859 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms