RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 SRPRBQ9Y5M8 271 aaKnown RBP11.06□□□□□ -0.64
NUDCD3-210ENST00000493613 NUP205Q92621 2012 aa11.06□□□□□ -0.64
NUDCD3-210ENST00000493613 HRO43593 1189 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 HUS1O60921 280 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 PRPF40AO75400 957 aaKnown RBP11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 LDHAP00338 332 aaKnown RBP11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 F11P03951 625 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 RETP07949 1114 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 IDEP14735 1019 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 HMGA1P17096 107 aaKnown RBP11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 SYT1P21579 422 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 CNR2P34972 360 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 CASP5P51878 434 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 ATXN1P54253 815 aaKnown RBP11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 NLRP12P59046 1061 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 BFSP1Q12934 665 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 RESTQ13127 1097 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 SRSF5Q13243 272 aaKnown RBP11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 NFE2Q16621 373 aaPredicted RBP11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 TMEM150AQ86TG1 271 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 BRSK2Q8IWQ3 736 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 SYCP3Q8IZU3 236 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 SYNPOQ8N3V7 929 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 C1orf127Q8N9H9 656 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 STKLD1Q8NE28 680 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 ZSWIM2Q8NEG5 633 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 NOC3LQ8WTT2 800 aaKnown RBP11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 CACTINQ8WUQ7 758 aaKnown RBP11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 PI4K2AQ9BTU6 479 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 GKN1Q9NS71 199 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 TMLHEQ9NVH6 421 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 C2orf42Q9NWW7 574 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 MAGED2Q9UNF1 606 aaPredicted RBP11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 AGAP1Q9UPQ3 857 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 CCL26Q9Y258 94 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 PCDHB13Q9Y5F0 798 aa11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.05□□□□□ -0.64
NUDCD3-210ENST00000493613 NCOR2Q9Y618 2525 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 CEP192Q8TEP8 1941 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 GOLGA8IPA6NC78 632 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 GOLGA8JA6NMD2 632 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 LRP3O75074 770 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 KRT19P08727 400 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 CSH1P0DML2 217 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 CSH2P0DML3 217 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 GARTP22102 1010 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 ACAT1P24752 427 aaKnown RBP11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 DDX6P26196 483 aaKnown RBP eCLIP11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 STAT6P42226 847 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 GPR15P49685 360 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 MYL7Q01449 175 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 ALCAMQ13740 583 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 RUNX3Q13761 415 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 TXNDC8Q6A555 127 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 TRIM68Q6AZZ1 485 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 CCDC73Q6ZRK6 1079 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 TMEM86AQ8N2M4 240 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 PDCL2Q8N4E4 241 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 LRRC52Q8N7C0 313 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 LEO1Q8WVC0 666 aaPredicted RBP11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 MRPS31Q92665 395 aaKnown RBP11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 USP13Q92995 863 aaPredicted RBP11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 FAM83CQ9BQN1 747 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 ACBD6Q9BR61 282 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 RTKNQ9BST9 563 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 FGFBP2Q9BYJ0 223 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 EBF3Q9H4W6 596 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 KIF9Q9HAQ2 790 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 FOXD4L1Q9NU39 408 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 TDP1Q9NUW8 608 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 DDX43Q9NXZ2 648 aaKnown RBP11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 ITGA11Q9UKX5 1188 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 L1RE1Q9UN81 338 aa11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 KMT2BQ9UMN6 2715 aaPredicted RBP11.04□□□□□ -0.64
NUDCD3-210ENST00000493613 THADAQ6YHU6 1953 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 DCDC2BA2VCK2 349 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 OTOL1A6NHN0 477 aaPredicted RBP11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 SOBPA7XYQ1 873 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 EXTL3O43909 919 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 TMEM191BP0C7N4 346 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 CYP2F1P24903 491 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 HOXC13P31276 330 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 RPL10AP62906 217 aaKnown RBP11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 DDR2Q16832 855 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 TMEM196Q5HYL7 178 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 INTS6LQ5JSJ4 861 aaKnown RBP11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 SDHAF4Q5VUM1 108 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 CC2D1AQ6P1N0 951 aaPredicted RBP11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 CEP68Q76N32 757 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 CSGALNACT2Q8N6G5 542 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 CXorf38Q8TB03 319 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 TRMT2BQ96GJ1 504 aaKnown RBP11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 FAM84AQ96KN4 292 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 CBWD1Q9BRT8 395 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 MTMR12Q9C0I1 747 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 PCIF1Q9H4Z3 704 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 PDE11AQ9HCR9 933 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 ABCB6Q9NP58 842 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 HPS4Q9NQG7 708 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms