RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TBXAS1P24557 533 aaPredicted RBP14.34□□□□□ -0.11
MSH6-208ENST00000493177 MFAP3P55082 362 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 LILRA4P59901 499 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 CUL2Q13617 745 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 TRIM14Q14142 442 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 GPR149Q86SP6 731 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 GPR65Q8IYL9 337 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 KREMEN2Q8NCW0 462 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 C3orf58Q8NDZ4 430 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 SMG7Q92540 1137 aaKnown RBP14.34□□□□□ -0.11
MSH6-208ENST00000493177 FAM81BQ96LP2 452 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 SPAG5Q96R06 1193 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 GANQ9H2C0 597 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 PLEKHA4Q9H4M7 779 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 VRTNQ9H8Y1 702 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 HCN4Q9Y3Q4 1203 aa14.34□□□□□ -0.11
MSH6-208ENST00000493177 C2CD4DB7Z1M9 353 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 CYB561D2O14569 222 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 HUS1O60921 280 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 NOL4O94818 638 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 RFX1P22670 979 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 PAX3P23760 479 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 IGFBP6P24592 240 aaPredicted RBP14.33□□□□□ -0.12
MSH6-208ENST00000493177 TKTP29401 623 aaKnown RBP14.33□□□□□ -0.12
MSH6-208ENST00000493177 GBP2P32456 591 aaPredicted RBP14.33□□□□□ -0.12
MSH6-208ENST00000493177 RAP1GAPP47736 663 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 YWHAEP62258 255 aaKnown RBP14.33□□□□□ -0.12
MSH6-208ENST00000493177 PPM1LQ5SGD2 360 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 DPY19L2P1Q6NXN4 242 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 ANKS3Q6ZW76 656 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 ENOSF1Q7L5Y1 443 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 PLCD3Q8N3E9 789 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 ZNF397Q8NF99 534 aaPredicted RBP14.33□□□□□ -0.12
MSH6-208ENST00000493177 LNX1Q8TBB1 728 aaPredicted RBP14.33□□□□□ -0.12
MSH6-208ENST00000493177 HDAC7Q8WUI4 952 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 KAT5Q92993 513 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 IQCDQ96DY2 449 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 SENP8Q96LD8 212 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 SMYD3Q9H7B4 428 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 CEP72Q9P209 647 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 AJAP1Q9UKB5 411 aaPredicted RBP14.33□□□□□ -0.12
MSH6-208ENST00000493177 DAAM1Q9Y4D1 1078 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 CUL9Q8IWT3 2517 aa14.33□□□□□ -0.12
MSH6-208ENST00000493177 ARHGEF37A1IGU5 675 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 PRR33A8MZF0 331 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 H7C4K7 107 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 RFPL2O75678 378 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 ODC1P11926 461 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 CD58P19256 250 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 CASP14P31944 242 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 OR1D2P34982 312 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 USP8P40818 1118 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 ASPAP45381 313 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 ARPP19P56211 112 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 GCNT1Q02742 428 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 FIGNQ5HY92 759 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 OTOP3Q7RTS5 596 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 APPL2Q8NEU8 664 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 KREMEN1Q96MU8 473 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 ARID3AQ99856 593 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 CLSTN3Q9BQT9 956 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 CYP3A43Q9HB55 503 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 GDAP2Q9NXN4 497 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 PCDHB4Q9Y5E5 795 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 CDY1Q9Y6F8 540 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 SCN1AP35498 2009 aa14.32□□□□□ -0.12
MSH6-208ENST00000493177 VCANP13611 3396 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 NCOR1O75376 2440 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 A0A1W2PQJ5 194 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 GYPCP04921 128 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 C8AP07357 584 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 KRT5P13647 590 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 FGFR3P22607 806 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 ELF1P32519 619 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 CDH8P55286 799 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 GOLGA8FQ08AF8 430 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 GOLGA8DPQ0D2H9 430 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 DRAP1Q14919 205 aaPredicted RBP14.31□□□□□ -0.12
MSH6-208ENST00000493177 CD300LGQ6UXG3 332 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 CYP26C1Q6V0L0 522 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 METTL23Q86XA0 190 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 GPIHBP1Q8IV16 184 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 TOP6BLQ8N6T0 577 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 CMASQ8NFW8 434 aaPredicted RBP14.31□□□□□ -0.12
MSH6-208ENST00000493177 EDAQ92838 391 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 FAXDC2Q96IV6 333 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 NAA15Q9BXJ9 866 aaKnown RBP14.31□□□□□ -0.12
MSH6-208ENST00000493177 STK33Q9BYT3 514 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 EDEM3Q9BZQ6 932 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 TTYH3Q9C0H2 523 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 SDCBP2Q9H190 292 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 SNX25Q9H3E2 840 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 ZDHHC7Q9NXF8 308 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 IMPACTQ9P2X3 320 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 MTRRQ9UBK8 725 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 FBXL5Q9UKA1 691 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 CAPN11Q9UMQ6 739 aa14.31□□□□□ -0.12
MSH6-208ENST00000493177 LUC7L2Q9Y383 392 aaKnown RBP14.31□□□□□ -0.12
MSH6-208ENST00000493177 TIMM13Q9Y5L4 95 aaPredicted RBP14.31□□□□□ -0.12
MSH6-208ENST00000493177 A0A0C4DFX4 3053 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms