RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 LCE2CQ5TA81 110 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 TTLL5Q6EMB2 1281 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 PCGF5Q86SE9 256 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 LYSMD2Q8IV50 215 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 COLGALT2Q8IYK4 626 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 NAXEQ8NCW5 288 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 PDCD2LQ9BRP1 358 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 COLEC11Q9BWP8 271 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 BARX1Q9HBU1 254 aaPredicted RBP3.51□□□□□ -1.85
SNX13-209ENST00000492626 GPRC5DQ9NZD1 345 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 FNIP2Q9P278 1114 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 AJAP1Q9UKB5 411 aaPredicted RBP3.51□□□□□ -1.85
SNX13-209ENST00000492626 PRNPP04156 253 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 CYP1A1P04798 512 aaPredicted RBP3.5□□□□□ -1.85
SNX13-209ENST00000492626 NAP1L1P55209 391 aaKnown RBP3.5□□□□□ -1.85
SNX13-209ENST00000492626 CD69Q07108 199 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 ZNF792Q3KQV3 632 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 PLA2G15Q8NCC3 412 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 NLGN4YQ8NFZ3 816 aaPredicted RBP3.5□□□□□ -1.85
SNX13-209ENST00000492626 KBTBD7Q8WVZ9 684 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 LRRC46Q96FV0 321 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 BRD9Q9H8M2 597 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 TM7SF3Q9NS93 570 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 CPNE7Q9UBL6 633 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 ZDHHC8Q9ULC8 765 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 COL4A5P29400 1685 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 IBTKQ9P2D0 1353 aaPredicted RBP3.5□□□□□ -1.85
SNX13-209ENST00000492626 GAAP10253 952 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 EEF1GP26641 437 aaKnown RBP3.5□□□□□ -1.85
SNX13-209ENST00000492626 PAPOLAP51003 745 aaKnown RBP3.5□□□□□ -1.85
SNX13-209ENST00000492626 STAT5BP51692 787 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 POU6F2P78424 691 aaPredicted RBP3.5□□□□□ -1.85
SNX13-209ENST00000492626 NKX6-1P78426 367 aaPredicted RBP3.5□□□□□ -1.85
SNX13-209ENST00000492626 MST1LQ2TV78 715 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 KLHDC7AQ5VTJ3 777 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 HIBCHQ6NVY1 386 aaPredicted RBP3.5□□□□□ -1.85
SNX13-209ENST00000492626 ZNF605Q86T29 641 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 TMEFF1Q8IYR6 380 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 KYQ8NBH2 561 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 CASKIN2Q8WXE0 1202 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 USP13Q92995 863 aaPredicted RBP3.5□□□□□ -1.85
SNX13-209ENST00000492626 ZNF333Q96JL9 665 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 GDF15Q99988 308 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 SLC26A6Q9BXS9 759 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 ZNF518BQ9C0D4 1074 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 C11orf54Q9H0W9 315 aaPredicted RBP3.5□□□□□ -1.85
SNX13-209ENST00000492626 UNC45AQ9H3U1 944 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 TBC1D23Q9NUY8 699 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.5□□□□□ -1.85
SNX13-209ENST00000492626 MAP3K20Q9NYL2 800 aaKnown RBP3.5□□□□□ -1.85
SNX13-209ENST00000492626 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.5□□□□□ -1.85
SNX13-209ENST00000492626 BCCIPQ9P287 314 aaKnown RBP eCLIP3.5□□□□□ -1.85
SNX13-209ENST00000492626 CTNND2Q9UQB3 1225 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 RABGAP1Q9Y3P9 1069 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 RAB3GAP2Q9H2M9 1393 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 A0A1W2PR48 441 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 H0YGN5 161 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 AGR2O95994 175 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 JUNP05412 331 aaKnown RBP3.5□□□□□ -1.85
SNX13-209ENST00000492626 DHRS4L1P0CG22 281 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 XRCC6P12956 609 aaKnown RBP eCLIP3.5□□□□□ -1.85
SNX13-209ENST00000492626 ATP5JP18859 108 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 CARSP49589 748 aaKnown RBP3.5□□□□□ -1.85
SNX13-209ENST00000492626 NPEPPSP55786 919 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 APBA1Q02410 837 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 SNAPC2Q13487 334 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 TIGD6Q17RP2 521 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 CR1LQ2VPA4 569 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 KRTAP21-3Q3LHN1 58 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 ZMAT1Q5H9K5 638 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 PHF19Q5T6S3 580 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 C4orf50Q6ZRC1 276 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 GPR155Q7Z3F1 870 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 ZBTB8AQ96BR9 441 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 SEMA6BQ9H3T3 888 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 A1CFQ9NQ94 594 aaKnown RBP3.5□□□□□ -1.85
SNX13-209ENST00000492626 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.5□□□□□ -1.85
SNX13-209ENST00000492626 USP40Q9NVE5 1235 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 KLHL14Q9P2G3 628 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 RBPJLQ9UBG7 517 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 STK17AQ9UEE5 414 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 TMX2Q9Y320 296 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 SCINQ9Y6U3 715 aa3.5□□□□□ -1.85
SNX13-209ENST00000492626 ZNF644Q9H582 1327 aaPredicted RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 PRRT4C9JH25 899 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 ADCY6O43306 1168 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 ARL4CP56559 192 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 CTXN1P60606 82 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 MRPS5P82675 430 aaKnown RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 TLE1Q04724 770 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 TARDBPQ13148 414 aaKnown RBP eCLIP3.49□□□□□ -1.85
SNX13-209ENST00000492626 STILQ15468 1287 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 MPEG1Q2M385 716 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 TIGD5Q53EQ6 642 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 KANK2Q63ZY3 851 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 ARL6IP4Q66PJ3 421 aaKnown RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 KLHL17Q6TDP4 642 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 CLASRPQ8N2M8 674 aaKnown RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 FAM26EQ8N5C1 309 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 PLBD2Q8NHP8 589 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms