RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 EVLQ9UI08 416 aaPredicted RBP12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 DSEQ9UL01 958 aa12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 TIMM13Q9Y5L4 95 aaPredicted RBP12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 ABLIM1O14639 778 aa12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 CLTAP09496 248 aa12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 HOXC13P31276 330 aa12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 MATR3P43243 847 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 GALK1P51570 392 aa12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 SIM1P81133 766 aaPredicted RBP12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 CYP4F8P98187 520 aa12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 ZNF268Q14587 947 aaPredicted RBP12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 MGAT5BQ3V5L5 792 aa12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 LMBRD2Q68DH5 695 aaPredicted RBP12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 TSTD1Q8NFU3 115 aa12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 SPPL2BQ8TCT7 592 aa12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 CD101Q93033 1021 aa12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 SEPT5Q99719 369 aaPredicted RBP12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 SLC46A2Q9BY10 475 aa12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 EBF3Q9H4W6 596 aa12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 HPS4Q9NQG7 708 aa12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 TDP1Q9NUW8 608 aa12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 TUBGCP4Q9UGJ1 667 aa12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 KIAA1024Q9UPX6 916 aa12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 DNM3Q9UQ16 869 aa12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 MYH11P35749 1972 aa12.08□□□□□ -0.48
CLCNKA-206ENST00000491433 H0YCG3 227 aa12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 CDX4O14627 284 aaPredicted RBP12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 DCLK1O15075 740 aa12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 HIP1RO75146 1068 aa12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 ALDH1A2O94788 518 aa12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 CTDNEP1O95476 244 aa12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 FXR2P51116 673 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 MCL1Q07820 350 aa12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 PSMD2Q13200 908 aa12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 HNRNPDQ14103 355 aaKnown RBP12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 UAP1L1Q3KQV9 507 aa12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 TAS1R3Q7RTX0 852 aa12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 METTL23Q86XA0 190 aa12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 CD302Q8IX05 232 aa12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 THEM5Q8N1Q8 247 aa12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 CHCHD4Q8N4Q1 142 aa12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 MRPS31Q92665 395 aaKnown RBP12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 NTPCRQ9BSD7 190 aaKnown RBP12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 IL21Q9HBE4 155 aa12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 POLD4Q9HCU8 107 aa12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 DDX19AQ9NUU7 478 aaKnown RBP12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 UXTQ9UBK9 157 aaPredicted RBP12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 LRWD1Q9UFC0 647 aa12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 TBX20Q9UMR3 447 aa12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 KIAA1549LQ6ZVL6 1849 aa12.07□□□□□ -0.48
CLCNKA-206ENST00000491433 TTC26A0AVF1 554 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 UPK3BL1B0FP48 263 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 UPK3BL2E5RIL1 263 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 WNT7AO00755 349 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 LARGE1O95461 756 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 CYP11A1P05108 521 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 CXCL8P10145 99 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 FDPSP14324 419 aaKnown RBP12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 GJA4P35212 333 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 DHPSP49366 369 aaPredicted RBP12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 LILRA4P59901 499 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 BYSLQ13895 437 aaKnown RBP12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 PDIA5Q14554 519 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 ZBTB6Q15916 424 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 SLC39A12Q504Y0 691 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 MAB21L3Q8N8X9 362 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 SPIRE2Q8WWL2 714 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 USP13Q92995 863 aaPredicted RBP12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 ATP2A3Q93084 1043 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 ZBTB45Q96K62 511 aaPredicted RBP12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 SPACA7Q96KW9 195 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 SENP8Q96LD8 212 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 CNOT6LQ96LI5 555 aaKnown RBP12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 KIF2CQ99661 725 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 LPIN3Q9BQK8 851 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 ECT2Q9H8V3 914 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 MYO16Q9Y6X6 1858 aa12.06□□□□□ -0.48
CLCNKA-206ENST00000491433 SLC16A4O15374 487 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 SOAT2O75908 522 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 CSH1P0DML2 217 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 CSH2P0DML3 217 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 SCP2P22307 547 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 IFNAR2P48551 515 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 IRX4P78413 519 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 TRIM61Q5EBN2 209 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 SPDYCQ5MJ68 293 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 TRIM68Q6AZZ1 485 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 LPCAT2Q7L5N7 544 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 MON1AQ86VX9 555 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 RASSF3Q86WH2 238 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 DCP1BQ8IZD4 617 aaKnown RBP12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 DAW1Q8N136 415 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 KCTD17Q8N5Z5 321 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 TTC9BQ8N6N2 239 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 MDM1Q8TC05 714 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 SNX29Q8TEQ0 813 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 OSCP1Q8WVF1 389 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 PIGKQ92643 395 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 BICD1Q96G01 975 aa12.05□□□□□ -0.48
CLCNKA-206ENST00000491433 CRELD1Q96HD1 420 aa12.05□□□□□ -0.48
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