RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 LRRC52Q8N7C0 313 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 ZSWIM3Q96MP5 696 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 SEPT5Q99719 369 aaPredicted RBP11.15□□□□□ -0.62
TTC28-207ENST00000490475 DNAJC25Q9H1X3 360 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 KIF9Q9HAQ2 790 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 LMAN1LQ9HAT1 526 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 ABCB6Q9NP58 842 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 USP25Q9UHP3 1055 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 GMEB2Q9UKD1 530 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 ITGA11Q9UKX5 1188 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 NDRG2Q9UN36 371 aaKnown RBP11.15□□□□□ -0.62
TTC28-207ENST00000490475 PCDHB5Q9Y5E4 795 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 CEP250Q9BV73 2442 aa11.15□□□□□ -0.63
TTC28-207ENST00000490475 TSC2P49815 1807 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 PRR5-ARHGAP8B1AHC4 643 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 ARNTLO00327 626 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 KLRC4O43908 158 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 HUS1O60921 280 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 PAPSS2O95340 614 aaPredicted RBP11.14□□□□□ -0.63
TTC28-207ENST00000490475 VNN2O95498 520 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 CSH1P0DML2 217 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 CSH2P0DML3 217 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 ADSSP30520 456 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 HOXD13P35453 343 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 AVPR1AP37288 418 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 CXCL12P48061 93 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 GUCY2FP51841 1108 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 RPL10AP62906 217 aaKnown RBP11.14□□□□□ -0.63
TTC28-207ENST00000490475 ARHGAP8P85298 464 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 MYL7Q01449 175 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 MYO1EQ12965 1108 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 MTAPQ13126 283 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 FZD5Q13467 585 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 KRBA2Q6ZNG9 492 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 UNC13DQ70J99 1090 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 GAREM2Q75VX8 874 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 DPH6Q7L8W6 267 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 BRSK2Q8IWQ3 736 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 KIAA2013Q8IYS2 634 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 BPIFB1Q8TDL5 484 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 CEP295NLQ96MC4 621 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 ACBD6Q9BR61 282 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 KIAA1586Q9HCI6 787 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 SLC39A2Q9NP94 309 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 SLC27A5Q9Y2P5 690 aa11.14□□□□□ -0.63
TTC28-207ENST00000490475 ZNF638Q14966 1978 aaKnown RBP11.14□□□□□ -0.63
TTC28-207ENST00000490475 COL4A2P08572 1712 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 PVALEFA0A1B0GWK0 134 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 MYBPHLA2RUH7 354 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 PPEF2O14830 753 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 EXTL3O43909 919 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 LRP3O75074 770 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 TMEM191BP0C7N4 346 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 PRR29P0C7W0 189 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 HAPLN1P10915 354 aaPredicted RBP11.13□□□□□ -0.63
TTC28-207ENST00000490475 CHRNB1P11230 501 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 GJA1P17302 382 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 CCNE1P24864 410 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 PCSK1P29120 753 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 LHX1P48742 406 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 RBP5P82980 135 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 TFAMQ00059 246 aaKnown RBP11.13□□□□□ -0.63
TTC28-207ENST00000490475 LMNB2Q03252 620 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 EHHADHQ08426 723 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 MAPRE1Q15691 268 aaKnown RBP11.13□□□□□ -0.63
TTC28-207ENST00000490475 FAM26FQ5R3K3 315 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 WSCD1Q658N2 575 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 POTEHQ6S545 545 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 CRELD2Q6UXH1 353 aaPredicted RBP11.13□□□□□ -0.63
TTC28-207ENST00000490475 EPM2AIP1Q7L775 607 aaPredicted RBP11.13□□□□□ -0.63
TTC28-207ENST00000490475 DGLUCYQ7Z3D6 616 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 FMR1NBQ8N0W7 255 aaPredicted RBP11.13□□□□□ -0.63
TTC28-207ENST00000490475 ZNF687Q8N1G0 1237 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 TMEM130Q8N3G9 435 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 ZSWIM2Q8NEG5 633 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 ENGASEQ8NFI3 743 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 OR10T2Q8NGX3 314 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 MRPS31Q92665 395 aaKnown RBP11.13□□□□□ -0.63
TTC28-207ENST00000490475 FUBP3Q96I24 572 aaKnown RBP eCLIP11.13□□□□□ -0.63
TTC28-207ENST00000490475 ANKRD36BP1Q96IX9 119 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 FAM213AQ9BRX8 229 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 CRISPLD1Q9H336 500 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 GDAP2Q9NXN4 497 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 ABI2Q9NYB9 513 aaPredicted RBP11.13□□□□□ -0.63
TTC28-207ENST00000490475 RBAKQ9NYW8 714 aaPredicted RBP11.13□□□□□ -0.63
TTC28-207ENST00000490475 EHD2Q9NZN4 543 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 SMG5Q9UPR3 1016 aaKnown RBP11.13□□□□□ -0.63
TTC28-207ENST00000490475 DMDP11532 3685 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 DENND4CQ5VZ89 1909 aa11.13□□□□□ -0.63
TTC28-207ENST00000490475 GPR179Q6PRD1 2367 aa11.12□□□□□ -0.63
TTC28-207ENST00000490475 SPECC1L-ADORA2AF8WAN1 911 aa11.12□□□□□ -0.63
TTC28-207ENST00000490475 ATG13O75143 517 aa11.12□□□□□ -0.63
TTC28-207ENST00000490475 RPN1P04843 607 aaKnown RBP11.12□□□□□ -0.63
TTC28-207ENST00000490475 HOXA6P31267 233 aa11.12□□□□□ -0.63
TTC28-207ENST00000490475 CTHP32929 405 aa11.12□□□□□ -0.63
TTC28-207ENST00000490475 PDE6CP51160 858 aa11.12□□□□□ -0.63
TTC28-207ENST00000490475 SNRPFP62306 86 aaKnown RBP11.12□□□□□ -0.63
TTC28-207ENST00000490475 DPYDQ12882 1025 aa11.12□□□□□ -0.63
TTC28-207ENST00000490475 BFSP1Q12934 665 aa11.12□□□□□ -0.63
TTC28-207ENST00000490475 STK4Q13043 487 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms