RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 PRPF6O94906 941 aaKnown RBP12.1□□□□□ -0.47
DUBR-204ENST00000490441 AVPR1AP37288 418 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 CXCL12P48061 93 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 RBP5P82980 135 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 MAMSTRQ6ZN01 415 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 LRRTM3Q86VH5 581 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 RALGPS2Q86X27 583 aaPredicted RBP12.1□□□□□ -0.47
DUBR-204ENST00000490441 ZNF687Q8N1G0 1237 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 TMEM86AQ8N2M4 240 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 GPD1LQ8N335 351 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 PDCL2Q8N4E4 241 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 DCLK2Q8N568 766 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 CSGALNACT2Q8N6G5 542 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 GPR161Q8N6U8 529 aaKnown RBP12.1□□□□□ -0.47
DUBR-204ENST00000490441 CELF5Q8N6W0 485 aaKnown RBP12.1□□□□□ -0.47
DUBR-204ENST00000490441 LRRC52Q8N7C0 313 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 C1orf127Q8N9H9 656 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 BPIFB1Q8TDL5 484 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 ANKRD36BP1Q96IX9 119 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 ZNF396Q96N95 335 aaPredicted RBP12.1□□□□□ -0.47
DUBR-204ENST00000490441 CBWD1Q9BRT8 395 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 PI4K2AQ9BTU6 479 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 MKNK1Q9BUB5 465 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 EPC1Q9H2F5 836 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 PCIF1Q9H4Z3 704 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 GMEB2Q9UKD1 530 aa12.1□□□□□ -0.47
DUBR-204ENST00000490441 COL4A2P08572 1712 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 NUP210Q8TEM1 1887 aaPredicted RBP12.09□□□□□ -0.47
DUBR-204ENST00000490441 A0A087X0B3 334 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 MYBPHLA2RUH7 354 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 SPECC1L-ADORA2AF8WAN1 911 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 SPTLC2O15270 562 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 LILRB5O75023 590 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 GABBR2O75899 941 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 PRAMEF12O95522 483 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 CSH1P0DML2 217 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 CSH2P0DML3 217 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 CHRNB1P11230 501 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 DDX6P26196 483 aaKnown RBP eCLIP12.09□□□□□ -0.47
DUBR-204ENST00000490441 PCSK1P29120 753 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 WEE1P30291 646 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 CTHP32929 405 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 SOX9P48436 509 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 NASPP49321 788 aaPredicted RBP12.09□□□□□ -0.47
DUBR-204ENST00000490441 WNT7BP56706 349 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 RPL10AP62906 217 aaKnown RBP12.09□□□□□ -0.47
DUBR-204ENST00000490441 AMPD3Q01432 767 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 MYO1EQ12965 1108 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 SURF1Q15526 300 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 DGKKQ5KSL6 1271 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 CMTM8Q8IZV2 173 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 ZSWIM2Q8NEG5 633 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 TTC8Q8TAM2 541 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 SPATA18Q8TC71 538 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 MRPS31Q92665 395 aaKnown RBP12.09□□□□□ -0.47
DUBR-204ENST00000490441 NELL1Q92832 810 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 ZFYVE19Q96K21 471 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 ACBD6Q9BR61 282 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 FGFBP2Q9BYJ0 223 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 MTMR12Q9C0I1 747 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 TNMDQ9H2S6 317 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 CUEDC2Q9H467 287 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 IL21Q9HBE4 155 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 PDE11AQ9HCR9 933 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 DDX43Q9NXZ2 648 aaKnown RBP12.09□□□□□ -0.47
DUBR-204ENST00000490441 GTSE1Q9NYZ3 720 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 UXTQ9UBK9 157 aaPredicted RBP12.09□□□□□ -0.47
DUBR-204ENST00000490441 L1RE1Q9UN81 338 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 MAGED2Q9UNF1 606 aaPredicted RBP12.09□□□□□ -0.47
DUBR-204ENST00000490441 SNX9Q9Y5X1 595 aa12.09□□□□□ -0.47
DUBR-204ENST00000490441 ZNF233A6NK53 670 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 TNNC2P02585 160 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 LHX1P48742 406 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 NLRP12P59046 1061 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 ASIC1P78348 528 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 FOXK1P85037 733 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 PUM1Q14671 1186 aaKnown RBP eCLIP12.08□□□□□ -0.48
DUBR-204ENST00000490441 ITPRIPL2Q3MIP1 535 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 INTS6LQ5JSJ4 861 aaKnown RBP12.08□□□□□ -0.48
DUBR-204ENST00000490441 DGLUCYQ7Z3D6 616 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 SPATA2LQ8IUW3 424 aaPredicted RBP12.08□□□□□ -0.48
DUBR-204ENST00000490441 ADGRF2Q8IZF7 708 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 SPEM1Q8N4L4 309 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 TOP6BLQ8N6T0 577 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 MAB21L3Q8N8X9 362 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 LINC00301Q8NCQ3 95 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 LEO1Q8WVC0 666 aaPredicted RBP12.08□□□□□ -0.48
DUBR-204ENST00000490441 RMDN1Q96DB5 314 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 LRRC3BQ96PB8 259 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 SLC46A2Q9BY10 475 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 SMG9Q9H0W8 520 aaKnown RBP12.08□□□□□ -0.48
DUBR-204ENST00000490441 KIF9Q9HAQ2 790 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 ABCB6Q9NP58 842 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 RBM12Q9NTZ6 932 aaKnown RBP12.08□□□□□ -0.48
DUBR-204ENST00000490441 TMLHEQ9NVH6 421 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 GDAP2Q9NXN4 497 aa12.08□□□□□ -0.48
DUBR-204ENST00000490441 SPTBN2O15020 2390 aa12.07□□□□□ -0.48
DUBR-204ENST00000490441 ZNF638Q14966 1978 aaKnown RBP12.07□□□□□ -0.48
DUBR-204ENST00000490441 PPP6R2O75170 966 aa12.07□□□□□ -0.48
DUBR-204ENST00000490441 HSP90AA1P07900 732 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms