RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 TNK2Q07912 1038 aa12.69□□□□□ -0.38
FDPS-215ENST00000490140 DMWDQ09019 674 aa12.69□□□□□ -0.38
FDPS-215ENST00000490140 ZNF268Q14587 947 aaPredicted RBP12.69□□□□□ -0.38
FDPS-215ENST00000490140 ELF2Q15723 593 aa12.69□□□□□ -0.38
FDPS-215ENST00000490140 ST3GAL2Q16842 350 aa12.69□□□□□ -0.38
FDPS-215ENST00000490140 C11orf74Q86VG3 221 aa12.69□□□□□ -0.38
FDPS-215ENST00000490140 MAB21L3Q8N8X9 362 aa12.69□□□□□ -0.38
FDPS-215ENST00000490140 CHAMP1Q96JM3 812 aa12.69□□□□□ -0.38
FDPS-215ENST00000490140 TMEM206Q9H813 350 aa12.69□□□□□ -0.38
FDPS-215ENST00000490140 GKN1Q9NS71 199 aa12.69□□□□□ -0.38
FDPS-215ENST00000490140 STK17AQ9UEE5 414 aa12.69□□□□□ -0.38
FDPS-215ENST00000490140 CCDC39Q9UFE4 941 aa12.69□□□□□ -0.38
FDPS-215ENST00000490140 SMC3Q9UQE7 1217 aa12.69□□□□□ -0.38
FDPS-215ENST00000490140 STYXL1Q9Y6J8 313 aa12.69□□□□□ -0.38
FDPS-215ENST00000490140 ANK1P16157 1881 aa12.69□□□□□ -0.38
FDPS-215ENST00000490140 PRPF40AO75400 957 aaKnown RBP12.68□□□□□ -0.38
FDPS-215ENST00000490140 ZNF806P0C7X5 589 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 GAP43P17677 238 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 PCSK1P29120 753 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 NR1H3Q13133 447 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 SRSF5Q13243 272 aaKnown RBP12.68□□□□□ -0.38
FDPS-215ENST00000490140 ALCAMQ13740 583 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 MCM6Q14566 821 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 WSCD1Q658N2 575 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 SLC39A4Q6P5W5 647 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 LRRC52Q8N7C0 313 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 GIPC2Q8TF65 315 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 ATP2A3Q93084 1043 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 TRMT2BQ96GJ1 504 aaKnown RBP12.68□□□□□ -0.38
FDPS-215ENST00000490140 LRRC3BQ96PB8 259 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 KIF2CQ99661 725 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 FAM83CQ9BQN1 747 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 ACBD6Q9BR61 282 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 SLC46A2Q9BY10 475 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 IL21Q9HBE4 155 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 EHD2Q9NZN4 543 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 ANGPTL2Q9UKU9 493 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 ITGA11Q9UKX5 1188 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 DENND4CQ5VZ89 1909 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 CEP295Q9C0D2 2601 aa12.68□□□□□ -0.38
FDPS-215ENST00000490140 TRAV19A0A0A6YYK7 116 aa12.67□□□□□ -0.38
FDPS-215ENST00000490140 EXTL3O43909 919 aa12.67□□□□□ -0.38
FDPS-215ENST00000490140 RHOBTB1O94844 696 aa12.67□□□□□ -0.38
FDPS-215ENST00000490140 USP17L7P0C7H9 530 aa12.67□□□□□ -0.38
FDPS-215ENST00000490140 NMT1P30419 496 aaKnown RBP12.67□□□□□ -0.38
FDPS-215ENST00000490140 DDIT3P35638 169 aa12.67□□□□□ -0.38
FDPS-215ENST00000490140 IFNAR2P48551 515 aa12.67□□□□□ -0.38
FDPS-215ENST00000490140 TFAMQ00059 246 aaKnown RBP12.67□□□□□ -0.38
FDPS-215ENST00000490140 FAM160A1Q05DH4 1040 aa12.67□□□□□ -0.38
FDPS-215ENST00000490140 MON1AQ86VX9 555 aa12.67□□□□□ -0.38
FDPS-215ENST00000490140 GPIHBP1Q8IV16 184 aa12.67□□□□□ -0.38
FDPS-215ENST00000490140 USP13Q92995 863 aaPredicted RBP12.67□□□□□ -0.38
FDPS-215ENST00000490140 FUBP3Q96I24 572 aaKnown RBP eCLIP12.67□□□□□ -0.38
FDPS-215ENST00000490140 TMX3Q96JJ7 454 aa12.67□□□□□ -0.38
FDPS-215ENST00000490140 P2RY13Q9BPV8 354 aa12.67□□□□□ -0.38
FDPS-215ENST00000490140 ARRDC1-AS1Q9H2J1 176 aa12.67□□□□□ -0.38
FDPS-215ENST00000490140 EBF3Q9H4W6 596 aa12.67□□□□□ -0.38
FDPS-215ENST00000490140 MRPL44Q9H9J2 332 aaKnown RBP12.67□□□□□ -0.38
FDPS-215ENST00000490140 VPS45Q9NRW7 570 aa12.67□□□□□ -0.38
FDPS-215ENST00000490140 BLOC1S4Q9NUP1 217 aa12.67□□□□□ -0.38
FDPS-215ENST00000490140 MAGED2Q9UNF1 606 aaPredicted RBP12.67□□□□□ -0.38
FDPS-215ENST00000490140 SDK1Q7Z5N4 2213 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 AXIN1O15169 862 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 RNF40O75150 1001 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 APBB3O95704 486 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 CKMP06732 381 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 PDCP20941 246 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 MPLP40238 635 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 RAP1GAPP47736 663 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 LHX1P48742 406 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 MYO1EQ12965 1108 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 KCNB1Q14721 858 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 MTF1Q14872 753 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 MAPRE1Q15691 268 aaKnown RBP12.66□□□□□ -0.38
FDPS-215ENST00000490140 ZC2HC1CQ53FD0 456 aaPredicted RBP12.66□□□□□ -0.38
FDPS-215ENST00000490140 LARP1BQ659C4 914 aaKnown RBP12.66□□□□□ -0.38
FDPS-215ENST00000490140 C4orf50Q6ZRC1 276 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 STXBP4Q6ZWJ1 553 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 SYT13Q7L8C5 426 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 ZNF720Q7Z2F6 126 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 SFR1Q86XK3 245 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 SPATA2LQ8IUW3 424 aaPredicted RBP12.66□□□□□ -0.38
FDPS-215ENST00000490140 BRSK2Q8IWQ3 736 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 SYCP3Q8IZU3 236 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 TMEM130Q8N3G9 435 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 ZC3H10Q96K80 434 aaKnown RBP12.66□□□□□ -0.38
FDPS-215ENST00000490140 CEP295NLQ96MC4 621 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 ACCSQ96QU6 501 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 FIZ1Q96SL8 496 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 SMG9Q9H0W8 520 aaKnown RBP12.66□□□□□ -0.38
FDPS-215ENST00000490140 TRPC7Q9HCX4 862 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 HPS4Q9NQG7 708 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 RBAKQ9NYW8 714 aaPredicted RBP12.66□□□□□ -0.38
FDPS-215ENST00000490140 PCDHB13Q9Y5F0 798 aa12.66□□□□□ -0.38
FDPS-215ENST00000490140 OBSL1O75147 1896 aa12.65□□□□□ -0.38
FDPS-215ENST00000490140 USP24Q9UPU5 2620 aa12.65□□□□□ -0.38
FDPS-215ENST00000490140 ANKRD63C9JTQ0 380 aa12.65□□□□□ -0.38
FDPS-215ENST00000490140 TULP1O00294 542 aaPredicted RBP12.65□□□□□ -0.38
FDPS-215ENST00000490140 KIAA0391O15091 583 aaKnown RBP12.65□□□□□ -0.38
FDPS-215ENST00000490140 GDF9O60383 454 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms