RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 C6orf118Q5T5N4 469 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 LRRC38Q5VT99 294 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 LLGL2Q6P1M3 1020 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 DLK2Q6UY11 383 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 SCARA5Q6ZMJ2 495 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 USP50Q70EL3 339 aaPredicted RBP10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ZNF365Q70YC5 407 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ARMC9Q7Z3E5 817 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 CCDC25Q86WR0 208 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 RCOR2Q8IZ40 523 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ATL2Q8NHH9 583 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 PRR7Q8TB68 274 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 MYCBPAPQ8TBZ2 947 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ZNF473Q8WTR7 871 aaKnown RBP10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 OPTNQ96CV9 577 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 FAXDC2Q96IV6 333 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 NLRP4Q96MN2 994 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 SCLT1Q96NL6 688 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 NFKBIZQ9BYH8 718 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 INO80BQ9C086 356 aaPredicted RBP10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 CDT1Q9H211 546 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 FZD8Q9H461 694 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 RPF1Q9H9Y2 349 aaKnown RBP10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 CISHQ9NSE2 258 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ERAP1Q9NZ08 941 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 RBPJLQ9UBG7 517 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 STRIP2Q9ULQ0 834 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 COL1A2P08123 1366 aa10.12□□□□□ -0.79
RAB3GAP1-205ENST00000489858 TMEM191CA6NGB0 347 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 E7EVH7 732 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 CAND2O75155 1236 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 C22orf31O95567 290 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 SHBGP04278 402 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 MCF2P10911 925 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 FGFR4P22455 802 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 EIF4BP23588 611 aaKnown RBP10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 VARSP26640 1264 aaKnown RBP10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 POLR2BP30876 1174 aaKnown RBP10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 CDH5P33151 784 aaPredicted RBP10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 PTPN7P35236 360 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 CLCN3P51790 818 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 CCNA1P78396 465 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ARHGAP1Q07960 439 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 KLF1Q13351 362 aaPredicted RBP10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 MOGSQ13724 837 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 LAMC2Q13753 1193 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 KYAT1Q16773 422 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 C2CD6Q53TS8 623 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ZNF667Q5HYK9 610 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 EEF1DP3Q658K8 133 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 GPAT2Q6NUI2 795 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 EFCAB12Q6NXP0 572 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 DCUN1D2Q6PH85 259 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 THNSL1Q8IYQ7 743 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 CCDC89Q8N998 374 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 CCHCR1Q8TD31 782 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ZC3H15Q8WU90 426 aaKnown RBP10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ATG4AQ8WYN0 398 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 CENPTQ96BT3 561 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 SELENOSQ9BQE4 189 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 FOXP3Q9BZS1 431 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ROPN1BQ9BZX4 212 aaPredicted RBP10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 RASSF4Q9H2L5 321 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 RABEP2Q9H5N1 569 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ROPN1Q9HAT0 212 aaPredicted RBP10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 PTPRHQ9HD43 1115 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 TXNRD2Q9NNW7 524 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 VTA1Q9NP79 307 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 CHST7Q9NS84 486 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 DDX56Q9NY93 547 aaKnown RBP10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ANAPC5Q9UJX4 755 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 GGA2Q9UJY4 613 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 TNFSF13BQ9Y275 285 aa10.11□□□□□ -0.79
RAB3GAP1-205ENST00000489858 PLXNA1Q9UIW2 1896 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 GMNCA6NCL1 334 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 MAGEB2O15479 319 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 FAM107AO95990 144 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 CST3P01034 146 aaPredicted RBP10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 GH1P01241 217 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 P4HA1P13674 534 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 CD19P15391 556 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ATP5DP30049 168 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ADCY8P40145 1251 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ASPAP45381 313 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ITGA8P53708 1063 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 LACTBP83111 547 aaPredicted RBP10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 POU5F1BQ06416 359 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 SNAPC2Q13487 334 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 PIGHQ14442 188 aaPredicted RBP10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 SLC29A2Q14542 456 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 AMHR2Q16671 573 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 FAM187BQ17R55 369 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 SKIDA1Q1XH10 827 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ZFYVE27Q5T4F4 411 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 MFSD5Q6N075 450 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 RHBDF2Q6PJF5 856 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 MOB2Q70IA6 237 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ARMCX2Q7L311 632 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 TAOK1Q7L7X3 1001 aa10.1□□□□□ -0.79
RAB3GAP1-205ENST00000489858 ERICH1Q86X53 443 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms