RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 HERPUD2Q9BSE4 406 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 PHACTR1Q9C0D0 580 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 RNPEPQ9H4A4 650 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 AAASQ9NRG9 546 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 EVPLQ92817 2033 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 PLXNB2O15031 1838 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 SMAPO00193 183 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 B4GALT5O43286 388 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 KRT19P08727 400 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 GABRB2P47870 512 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 SEC24CP53992 1094 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 SLC20A2Q08357 652 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 ZNF252P-AS1Q0IIN9 211 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 STAT4Q14765 748 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 ZNF394Q53GI3 561 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 EEF1DP3Q658K8 133 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 HIBCHQ6NVY1 386 aaPredicted RBP15.77■□□□□ 0.12
COL9A1-208ENST00000489611 TAPT1Q6NXT6 567 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 PCGF5Q86SE9 256 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 ZNF410Q86VK4 478 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 C10orf67Q8IYJ2 551 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 C1orf127Q8N9H9 656 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 TRAPPC12Q8WVT3 735 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 TFAP2BQ92481 460 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 NXF1Q9UBU9 619 aaKnown RBP15.77■□□□□ 0.12
COL9A1-208ENST00000489611 IVNS1ABPQ9Y6Y0 642 aa15.77■□□□□ 0.12
COL9A1-208ENST00000489611 hCG_1818297A0A087WSY0 165 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 DCDC2CA8MYV0 355 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 VDRP11473 427 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 CD19P15391 556 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 RAD23BP54727 409 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 NR1H3Q13133 447 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 AMHR2Q16671 573 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 IZUMO3Q5VZ72 239 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 CYP4F22Q6NT55 531 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 MAMDC4Q6UXC1 1216 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 OTUD6BQ8N6M0 293 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 ALLCQ8N6M5 410 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 COPS5Q92905 334 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 TMEM176AQ96HP8 235 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 MINDY3Q9H8M7 445 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 INTS9Q9NV88 658 aaKnown RBP15.76■□□□□ 0.11
COL9A1-208ENST00000489611 SIX4Q9UIU6 781 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 ZNF148Q9UQR1 794 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 ACTL7BQ9Y614 415 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 LACTBL1A8MY62 500 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 F8VP50 259 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 GPR25O00155 361 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 CDH16O75309 829 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 CILPO75339 1184 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 CPP00450 1065 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 ATF7P17544 494 aaPredicted RBP15.76■□□□□ 0.11
COL9A1-208ENST00000489611 CDKN2BP42772 138 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 VCPP55072 806 aaKnown RBP15.76■□□□□ 0.11
COL9A1-208ENST00000489611 PTPN11Q06124 597 aaPredicted RBP15.76■□□□□ 0.11
COL9A1-208ENST00000489611 IRF5Q13568 498 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 MORF4L2Q15014 288 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 CNGA2Q16280 664 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 SKIDA1Q1XH10 827 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 SCARA5Q6ZMJ2 495 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 CPLX4Q7Z7G2 160 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 TADA2BQ86TJ2 420 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 CFAP57Q96MR6 1250 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 NSRP1Q9H0G5 558 aaKnown RBP15.76■□□□□ 0.11
COL9A1-208ENST00000489611 PDZD7Q9H5P4 517 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 SYNCQ9H7C4 482 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 PLEKHA5Q9HAU0 1116 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 PDGFCQ9NRA1 345 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 LGALS13Q9UHV8 139 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 AKT3Q9Y243 479 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 DERAQ9Y315 318 aa15.76■□□□□ 0.11
COL9A1-208ENST00000489611 O00370 1275 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 DNALI1O14645 258 aaPredicted RBP15.75■□□□□ 0.11
COL9A1-208ENST00000489611 CAPN15O75808 1086 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 CHN1P15882 459 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 PSMA2P25787 234 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 SNX16P57768 344 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 INHBEP58166 350 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 OSTNP61366 133 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 RBP5P82980 135 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 INCA1Q0VD86 236 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 TMEM132DQ14C87 1099 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 DCAF4L1Q3SXM0 396 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 JADE1Q6IE81 842 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 MFSD7Q6UXD7 560 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 PLEKHH3Q7Z736 793 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 CACNA2D3Q8IZS8 1091 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 EPS8L3Q8TE67 593 aaKnown RBP15.75■□□□□ 0.11
COL9A1-208ENST00000489611 NCAPGQ9BPX3 1015 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 PCDH9Q9HC56 1237 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 SHOC2Q9UQ13 582 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 MGAMO43451 1857 aa15.75■□□□□ 0.11
COL9A1-208ENST00000489611 A0A087WZ62 844 aa15.74■□□□□ 0.11
COL9A1-208ENST00000489611 LRRD1A4D1F6 860 aa15.74■□□□□ 0.11
COL9A1-208ENST00000489611 RNF8O76064 485 aa15.74■□□□□ 0.11
COL9A1-208ENST00000489611 ITGB3P05106 788 aa15.74■□□□□ 0.11
COL9A1-208ENST00000489611 NFICP08651 508 aa15.74■□□□□ 0.11
COL9A1-208ENST00000489611 IQCF3P0C7M6 154 aa15.74■□□□□ 0.11
COL9A1-208ENST00000489611 HOXD8P13378 290 aaPredicted RBP15.74■□□□□ 0.11
COL9A1-208ENST00000489611 SSTR3P32745 418 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms