RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 NME7Q9Y5B8 376 aa14.77□□□□□ -0.05
C9orf3-221ENST00000489562 ATP8B3O60423 1300 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 C2CD2LO14523 706 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 GRM6O15303 877 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 LILRB3O75022 631 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 CXCL14O95715 111 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 SERPING1P05155 500 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 CD19P15391 556 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 CYP11B1P15538 503 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 NDUFV1P49821 464 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 CDK17Q00537 523 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 ARID5AQ03989 594 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 KLHL30Q0D2K2 578 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 GPR17Q13304 367 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 PTPROQ16827 1216 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 ARHGAP17Q68EM7 881 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 FAM171BQ6P995 826 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 C4orf50Q6ZRC1 276 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 IRF2BP2Q7Z5L9 587 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 MYCBPAPQ8TBZ2 947 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 EPS8L1Q8TE68 723 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 PKMYT1Q99640 499 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 EMILIN2Q9BXX0 1053 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 DPEP3Q9H4B8 488 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 ZNF576Q9H609 170 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 MAFFQ9ULX9 164 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 CDY1Q9Y6F8 540 aa14.76□□□□□ -0.05
C9orf3-221ENST00000489562 RANBP2P49792 3224 aaKnown RBP14.75□□□□□ -0.05
C9orf3-221ENST00000489562 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.75□□□□□ -0.05
C9orf3-221ENST00000489562 THAP12O43422 761 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 HCRTO43612 131 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 NRDCO43847 1150 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 C1RP00736 705 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 ADH1AP07327 375 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 CPB1P15086 417 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 ANXA13P27216 316 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 ERVFC1P60507 584 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 PSMC1P62191 440 aaKnown RBP14.75□□□□□ -0.05
C9orf3-221ENST00000489562 ORC1Q13415 861 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 CNGA2Q16280 664 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 MDH1BQ5I0G3 518 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 TPGS2Q68CL5 300 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 SLC47A2Q86VL8 602 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 VPS36Q86VN1 386 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 MRPL43Q8N983 215 aaKnown RBP14.75□□□□□ -0.05
C9orf3-221ENST00000489562 ZNF606Q8WXB4 792 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 CYFIP2Q96F07 1278 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 FUBP3Q96I24 572 aaKnown RBP eCLIP14.75□□□□□ -0.05
C9orf3-221ENST00000489562 PPP1R9BQ96SB3 815 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 HNRNPABQ99729 332 aaKnown RBP14.75□□□□□ -0.05
C9orf3-221ENST00000489562 CLSTN3Q9BQT9 956 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 CERS4Q9HA82 394 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 ABCB6Q9NP58 842 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 CRTAC1Q9NQ79 661 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 NOCTQ9UK39 431 aaKnown RBP14.75□□□□□ -0.05
C9orf3-221ENST00000489562 MYO7AQ13402 2215 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 PLXNA3P51805 1871 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 PATJQ8NI35 1801 aa14.75□□□□□ -0.05
C9orf3-221ENST00000489562 SSU72P8A0A1W2PR75 194 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 C2orf71A6NGG8 1288 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 O00370 1275 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 ATP2C2O75185 946 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 FECHP22830 423 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 BRD2P25440 801 aaKnown RBP14.74□□□□□ -0.05
C9orf3-221ENST00000489562 DNAJB1P25685 340 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 OR1D2P34982 312 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 CA8P35219 290 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 CDR2Q01850 454 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 ROR1Q01973 937 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 CAMK1Q14012 370 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 RAB33AQ14088 237 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 CFAP221Q4G0U5 840 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 SLC39A12Q504Y0 691 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 TDRD12Q587J7 1177 aaKnown RBP14.74□□□□□ -0.05
C9orf3-221ENST00000489562 PLPP4Q5VZY2 271 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 E4F1Q66K89 784 aaPredicted RBP14.74□□□□□ -0.05
C9orf3-221ENST00000489562 LCLAT1Q6UWP7 414 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 TRIM72Q6ZMU5 477 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 CCDC186Q7Z3E2 898 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 NOP9Q86U38 636 aaKnown RBP14.74□□□□□ -0.05
C9orf3-221ENST00000489562 CCDC112Q8NEF3 446 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 ZNF461Q8TAF7 563 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 SPPL2BQ8TCT7 592 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 MICAL1Q8TDZ2 1067 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 GDPD5Q8WTR4 605 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 PPP2R3CQ969Q6 453 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 PCED1BQ96HM7 432 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 FAM49BQ9NUQ9 324 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 HSFX1Q9UBD0 423 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 HESX1Q9UBX0 185 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 GTF3C4Q9UKN8 822 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 PCDHGC3Q9UN70 934 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.74□□□□□ -0.05
C9orf3-221ENST00000489562 CEP83Q9Y592 693 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 PCDHB5Q9Y5E4 795 aa14.74□□□□□ -0.05
C9orf3-221ENST00000489562 MYBPHLA2RUH7 354 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 TEX28O15482 410 aa14.73□□□□□ -0.05
C9orf3-221ENST00000489562 PTMAP06454 111 aaKnown RBP14.73□□□□□ -0.05
C9orf3-221ENST00000489562 CNPP09543 421 aaKnown RBP14.73□□□□□ -0.05
C9orf3-221ENST00000489562 RPL17P18621 184 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms