RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 C2orf42Q9NWW7 574 aa11.2□□□□□ -0.62
CHKB-211ENST00000489453 UXTQ9UBK9 157 aaPredicted RBP11.2□□□□□ -0.62
CHKB-211ENST00000489453 SMC3Q9UQE7 1217 aa11.2□□□□□ -0.62
CHKB-211ENST00000489453 R3HCC1Q9Y3T6 440 aaKnown RBP11.2□□□□□ -0.62
CHKB-211ENST00000489453 CCDC163A0A0D9SF12 145 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 KPNA7A9QM74 516 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 TISP43B9A030 160 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 ANKRD63C9JTQ0 380 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 HUS1O60921 280 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 RNF40O75150 1001 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 EPN2O95208 641 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 CSH1P0DML2 217 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 CSH2P0DML3 217 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 DRD1P21728 446 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 RPL10AP62906 217 aaKnown RBP11.19□□□□□ -0.62
CHKB-211ENST00000489453 TFAMQ00059 246 aaKnown RBP11.19□□□□□ -0.62
CHKB-211ENST00000489453 MYL7Q01449 175 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 POSTNQ15063 836 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 PDGFRLQ15198 375 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 SF3A2Q15428 464 aaKnown RBP11.19□□□□□ -0.62
CHKB-211ENST00000489453 CCDC6Q16204 474 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 ZC2HC1CQ53FD0 456 aaPredicted RBP11.19□□□□□ -0.62
CHKB-211ENST00000489453 TMEM196Q5HYL7 178 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 TRIM68Q6AZZ1 485 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 FSTL4Q6MZW2 842 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 NT5DC4Q86YG4 428 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 NOC3LQ8WTT2 800 aaKnown RBP11.19□□□□□ -0.62
CHKB-211ENST00000489453 USP13Q92995 863 aaPredicted RBP11.19□□□□□ -0.62
CHKB-211ENST00000489453 HVCN1Q96D96 273 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 KIF2CQ99661 725 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 PI4K2AQ9BTU6 479 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 TRPC7Q9HCX4 862 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 HPS4Q9NQG7 708 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 EXOC7Q9UPT5 735 aa11.19□□□□□ -0.62
CHKB-211ENST00000489453 PTPRDP23468 1912 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 TRAV19A0A0A6YYK7 116 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 SOBPA7XYQ1 873 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 TRDMT1O14717 391 aaKnown RBP11.18□□□□□ -0.62
CHKB-211ENST00000489453 AKAP3O75969 853 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 EGFP01133 1207 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 CKMP06732 381 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 ZNF806P0C7X5 589 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 IFNAR2P48551 515 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 LIMK1P53667 647 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 POU5F1Q01860 360 aaKnown RBP11.18□□□□□ -0.62
CHKB-211ENST00000489453 PSMD2Q13200 908 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 ELF2Q15723 593 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 LARP1BQ659C4 914 aaKnown RBP11.18□□□□□ -0.62
CHKB-211ENST00000489453 TXNDC8Q6A555 127 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 PKN3Q6P5Z2 889 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 DYMQ7RTS9 669 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 KBTBD6Q86V97 674 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 LRRTM3Q86VH5 581 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 MON1AQ86VX9 555 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 EFCAB13Q8IY85 973 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 CAMKK1Q8N5S9 505 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 CACTINQ8WUQ7 758 aaKnown RBP11.18□□□□□ -0.62
CHKB-211ENST00000489453 ACDQ96AP0 544 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 TMX3Q96JJ7 454 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 HHIPQ96QV1 700 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 P2RY13Q9BPV8 354 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 FAM83CQ9BQN1 747 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 FAM213AQ9BRX8 229 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 CCSER1Q9C0I3 900 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 MRPL44Q9H9J2 332 aaKnown RBP11.18□□□□□ -0.62
CHKB-211ENST00000489453 DUS2Q9NX74 493 aaKnown RBP11.18□□□□□ -0.62
CHKB-211ENST00000489453 CCDC39Q9UFE4 941 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 ANGPTL2Q9UKU9 493 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 CCL26Q9Y258 94 aa11.18□□□□□ -0.62
CHKB-211ENST00000489453 KMT2BQ9UMN6 2715 aaPredicted RBP11.18□□□□□ -0.62
CHKB-211ENST00000489453 MYH10P35580 1976 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 CHD8Q9HCK8 2581 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 RHOBTB1O94844 696 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 F11P03951 625 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 KRT19P08727 400 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 USP17L7P0C7H9 530 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 ARSAP15289 507 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 POLR2BP30876 1174 aaKnown RBP11.17□□□□□ -0.62
CHKB-211ENST00000489453 HOXC13P31276 330 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 TXLNAP40222 546 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 GPR15P49685 360 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 NR1H3Q13133 447 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 ZNF268Q14587 947 aaPredicted RBP11.17□□□□□ -0.62
CHKB-211ENST00000489453 MTF1Q14872 753 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 DDR2Q16832 855 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 FBXO43Q4G163 708 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 STPG1Q5TH74 334 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 SDHAF4Q5VUM1 108 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 BRAPQ7Z569 592 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 SFR1Q86XK3 245 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 SPATA2LQ8IUW3 424 aaPredicted RBP11.17□□□□□ -0.62
CHKB-211ENST00000489453 SCN4BQ8IWT1 228 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 SYCP3Q8IZU3 236 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 PDCL2Q8N4E4 241 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 FSIP1Q8NA03 581 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 STKLD1Q8NE28 680 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 RPLP0P6Q8NHW5 317 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 LRRC15Q8TF66 581 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 ATP2A3Q93084 1043 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 ACCSQ96QU6 501 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms