RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 R3HCC1Q9Y3T6 440 aaKnown RBP12.85□□□□□ -0.35
SFXN3-207ENST00000489434 ATG2BQ96BY7 2078 aa12.85□□□□□ -0.35
SFXN3-207ENST00000489434 DENND4CQ5VZ89 1909 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 TISP43B9A030 160 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 HUS1O60921 280 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 PRPF40AO75400 957 aaKnown RBP12.84□□□□□ -0.35
SFXN3-207ENST00000489434 RPP40O75818 363 aaKnown RBP12.84□□□□□ -0.35
SFXN3-207ENST00000489434 ADRB1P08588 477 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 CCDC192P0DO97 292 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 GAP43P17677 238 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 RPL10AP62906 217 aaKnown RBP12.84□□□□□ -0.35
SFXN3-207ENST00000489434 PDGFRLQ15198 375 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 SF3A1Q15459 793 aaKnown RBP12.84□□□□□ -0.35
SFXN3-207ENST00000489434 C8orf34Q49A92 452 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 TMEM196Q5HYL7 178 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 DYMQ7RTS9 669 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 ZNF720Q7Z2F6 126 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 CACNA2D4Q7Z3S7 1137 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 LRRTM3Q86VH5 581 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 MON1AQ86VX9 555 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 SFR1Q86XK3 245 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 LRRC15Q8TF66 581 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 GAB3Q8WWW8 586 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 ACCSQ96QU6 501 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 FIZ1Q96SL8 496 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 FAM83CQ9BQN1 747 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 EBF3Q9H4W6 596 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 ABCB6Q9NP58 842 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 MAGED2Q9UNF1 606 aaPredicted RBP12.84□□□□□ -0.35
SFXN3-207ENST00000489434 KMT2BQ9UMN6 2715 aaPredicted RBP12.84□□□□□ -0.35
SFXN3-207ENST00000489434 CEP295Q9C0D2 2601 aa12.84□□□□□ -0.35
SFXN3-207ENST00000489434 TRDMT1O14717 391 aaKnown RBP12.83□□□□□ -0.36
SFXN3-207ENST00000489434 EXTL3O43909 919 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 AKAP3O75969 853 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 LDHAP00338 332 aaKnown RBP12.83□□□□□ -0.36
SFXN3-207ENST00000489434 DRD1P21728 446 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 KCNA4P22459 653 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 MYL7Q01449 175 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 FBXO43Q4G163 708 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 AASDHQ4L235 1098 aaPredicted RBP12.83□□□□□ -0.36
SFXN3-207ENST00000489434 WDR44Q5JSH3 913 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 SV2BQ7L1I2 683 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 EFCAB13Q8IY85 973 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 SYCP3Q8IZU3 236 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 TMEM86AQ8N2M4 240 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 CPA6Q8N4T0 437 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 CAMKK1Q8N5S9 505 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 USP13Q92995 863 aaPredicted RBP12.83□□□□□ -0.36
SFXN3-207ENST00000489434 ACBD6Q9BR61 282 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 FAM213AQ9BRX8 229 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 PI4K2AQ9BTU6 479 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 C2orf42Q9NWW7 574 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 AGAP1Q9UPQ3 857 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 CCL26Q9Y258 94 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 PCDHB13Q9Y5F0 798 aa12.83□□□□□ -0.36
SFXN3-207ENST00000489434 GREB1Q4ZG55 1949 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 AXIN1O15169 862 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 F11P03951 625 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 ITGB3P05106 788 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 HMGA1P17096 107 aaKnown RBP12.82□□□□□ -0.36
SFXN3-207ENST00000489434 PDCP20941 246 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 PCSK1P29120 753 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 ADSSP30520 456 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 POLR2BP30876 1174 aaKnown RBP12.82□□□□□ -0.36
SFXN3-207ENST00000489434 GRIN1Q05586 938 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 ALCAMQ13740 583 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 ZNF268Q14587 947 aaPredicted RBP12.82□□□□□ -0.36
SFXN3-207ENST00000489434 RRAGBQ5VZM2 374 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 TXNDC8Q6A555 127 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 FSTL4Q6MZW2 842 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 CRELD2Q6UXH1 353 aaPredicted RBP12.82□□□□□ -0.36
SFXN3-207ENST00000489434 PDCL2Q8N4E4 241 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 LRRC52Q8N7C0 313 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 FSIP1Q8NA03 581 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 CCDC26Q8TAB7 109 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 SPATA18Q8TC71 538 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 LEO1Q8WVC0 666 aaPredicted RBP12.82□□□□□ -0.36
SFXN3-207ENST00000489434 EPSTI1Q96J88 318 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 P2RY13Q9BPV8 354 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 ARRDC1-AS1Q9H2J1 176 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 HPS4Q9NQG7 708 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 DDX43Q9NXZ2 648 aaKnown RBP12.82□□□□□ -0.36
SFXN3-207ENST00000489434 RBAKQ9NYW8 714 aaPredicted RBP12.82□□□□□ -0.36
SFXN3-207ENST00000489434 ITGA11Q9UKX5 1188 aa12.82□□□□□ -0.36
SFXN3-207ENST00000489434 TRAV19A0A0A6YYK7 116 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 VPS37CA5D8V6 355 aaPredicted RBP12.81□□□□□ -0.36
SFXN3-207ENST00000489434 GDF9O60383 454 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 RNF40O75150 1001 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 PPP1R37O75864 691 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 GCNT3O95395 438 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 CKMP06732 381 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 KRT19P08727 400 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 USP17L7P0C7H9 530 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 ZNF806P0C7X5 589 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 LHX1P48742 406 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 PXNP49023 591 aaPredicted RBP12.81□□□□□ -0.36
SFXN3-207ENST00000489434 PDE6CP51160 858 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 LIMK1P53667 647 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 RBP5P82980 135 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 FAM160A1Q05DH4 1040 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms