RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 AGAP1Q9UPQ3 857 aa4.45□□□□□ -1.7
CBWD1-216ENST00000489272 PCDHA3Q9Y5H8 950 aa4.45□□□□□ -1.7
CBWD1-216ENST00000489272 ZNF804BA4D1E1 1349 aa4.45□□□□□ -1.7
CBWD1-216ENST00000489272 JTBO76095 146 aa4.44□□□□□ -1.7
CBWD1-216ENST00000489272 ZRANB2O95218 330 aaKnown RBP eCLIP4.44□□□□□ -1.7
CBWD1-216ENST00000489272 FTLP02792 175 aaPredicted RBP4.44□□□□□ -1.7
CBWD1-216ENST00000489272 PCSK6P29122 969 aa4.44□□□□□ -1.7
CBWD1-216ENST00000489272 ALDH9A1P49189 494 aa4.44□□□□□ -1.7
CBWD1-216ENST00000489272 HK3P52790 923 aa4.44□□□□□ -1.7
CBWD1-216ENST00000489272 MTX3Q5HYI7 312 aa4.44□□□□□ -1.7
CBWD1-216ENST00000489272 HEATR3Q7Z4Q2 680 aa4.44□□□□□ -1.7
CBWD1-216ENST00000489272 ZNF804AQ7Z570 1209 aa4.44□□□□□ -1.7
CBWD1-216ENST00000489272 USP37Q86T82 979 aa4.44□□□□□ -1.7
CBWD1-216ENST00000489272 FAM109AQ8N4B1 249 aa4.44□□□□□ -1.7
CBWD1-216ENST00000489272 CPA6Q8N4T0 437 aa4.44□□□□□ -1.7
CBWD1-216ENST00000489272 TBC1D5Q92609 795 aa4.44□□□□□ -1.7
CBWD1-216ENST00000489272 SEMA4CQ9C0C4 833 aa4.44□□□□□ -1.7
CBWD1-216ENST00000489272 MRPL46Q9H2W6 279 aaKnown RBP4.44□□□□□ -1.7
CBWD1-216ENST00000489272 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.44□□□□□ -1.7
CBWD1-216ENST00000489272 SH3BP4Q9P0V3 963 aa4.44□□□□□ -1.7
CBWD1-216ENST00000489272 TNKSO95271 1327 aa4.44□□□□□ -1.7
CBWD1-216ENST00000489272 FNDC1Q4ZHG4 1894 aaPredicted RBP4.43□□□□□ -1.7
CBWD1-216ENST00000489272 PRR23D1E9PI22 279 aaPredicted RBP4.43□□□□□ -1.7
CBWD1-216ENST00000489272 PPM1DO15297 605 aa4.43□□□□□ -1.7
CBWD1-216ENST00000489272 PRR35P0CG20 571 aa4.43□□□□□ -1.7
CBWD1-216ENST00000489272 PRR23D2P0DMB1 279 aaPredicted RBP4.43□□□□□ -1.7
CBWD1-216ENST00000489272 KELP23276 732 aa4.43□□□□□ -1.7
CBWD1-216ENST00000489272 EPHB2P29323 1055 aa4.43□□□□□ -1.7
CBWD1-216ENST00000489272 TOB1P50616 345 aaPredicted RBP4.43□□□□□ -1.7
CBWD1-216ENST00000489272 SLC44A4Q53GD3 710 aa4.43□□□□□ -1.7
CBWD1-216ENST00000489272 FAM160B1Q5W0V3 765 aa4.43□□□□□ -1.7
CBWD1-216ENST00000489272 ZNF626Q68DY1 528 aa4.43□□□□□ -1.7
CBWD1-216ENST00000489272 SFRP4Q6FHJ7 346 aaPredicted RBP4.43□□□□□ -1.7
CBWD1-216ENST00000489272 TMEM108Q6UXF1 575 aa4.43□□□□□ -1.7
CBWD1-216ENST00000489272 ZNF517Q6ZMY9 492 aaPredicted RBP4.43□□□□□ -1.7
CBWD1-216ENST00000489272 ZBTB8BQ8NAP8 495 aaPredicted RBP4.43□□□□□ -1.7
CBWD1-216ENST00000489272 FANCBQ8NB91 859 aa4.43□□□□□ -1.7
CBWD1-216ENST00000489272 SMAD5Q99717 465 aaKnown RBP4.43□□□□□ -1.7
CBWD1-216ENST00000489272 NRIP3Q9NQ35 241 aa4.43□□□□□ -1.7
CBWD1-216ENST00000489272 LMBRD1Q9NUN5 540 aa4.43□□□□□ -1.7
CBWD1-216ENST00000489272 TLR5O60602 858 aa4.42□□□□□ -1.7
CBWD1-216ENST00000489272 PDHA1P08559 390 aa4.42□□□□□ -1.7
CBWD1-216ENST00000489272 FAM163BP0C2L3 166 aa4.42□□□□□ -1.7
CBWD1-216ENST00000489272 PIM1P11309 404 aaPredicted RBP4.42□□□□□ -1.7
CBWD1-216ENST00000489272 JUPP14923 745 aa4.42□□□□□ -1.7
CBWD1-216ENST00000489272 PDCP20941 246 aa4.42□□□□□ -1.7
CBWD1-216ENST00000489272 CERS1P27544 350 aa4.42□□□□□ -1.7
CBWD1-216ENST00000489272 RECQLP46063 649 aaPredicted RBP4.42□□□□□ -1.7
CBWD1-216ENST00000489272 SSBP2P81877 361 aaPredicted RBP4.42□□□□□ -1.7
CBWD1-216ENST00000489272 AARS2Q5JTZ9 985 aaKnown RBP4.42□□□□□ -1.7
CBWD1-216ENST00000489272 ICE2Q659A1 982 aa4.42□□□□□ -1.7
CBWD1-216ENST00000489272 ANKRD16Q6P6B7 361 aa4.42□□□□□ -1.7
CBWD1-216ENST00000489272 WDR53Q7Z5U6 358 aaPredicted RBP4.42□□□□□ -1.7
CBWD1-216ENST00000489272 FAM167AQ96KS9 214 aa4.42□□□□□ -1.7
CBWD1-216ENST00000489272 PUS7Q96PZ0 661 aaKnown RBP4.42□□□□□ -1.7
CBWD1-216ENST00000489272 SERHLQ9NQF3 203 aa4.42□□□□□ -1.7
CBWD1-216ENST00000489272 SPEF1Q9Y4P9 236 aa4.42□□□□□ -1.7
CBWD1-216ENST00000489272 LRP12Q9Y561 859 aa4.42□□□□□ -1.7
CBWD1-216ENST00000489272 H0YIZ8 118 aa4.41□□□□□ -1.7
CBWD1-216ENST00000489272 QSOX1O00391 747 aa4.41□□□□□ -1.7
CBWD1-216ENST00000489272 SLC16A3O15427 465 aaKnown RBP4.41□□□□□ -1.7
CBWD1-216ENST00000489272 SNUPNO95149 360 aaKnown RBP4.41□□□□□ -1.7
CBWD1-216ENST00000489272 AHSGP02765 367 aa4.41□□□□□ -1.7
CBWD1-216ENST00000489272 TYRP14679 529 aa4.41□□□□□ -1.7
CBWD1-216ENST00000489272 EEFSECP57772 596 aaKnown RBP4.41□□□□□ -1.7
CBWD1-216ENST00000489272 TUBA4AP68366 448 aa4.41□□□□□ -1.7
CBWD1-216ENST00000489272 AMPD3Q01432 767 aa4.41□□□□□ -1.7
CBWD1-216ENST00000489272 PROSER3Q2NL68 480 aa4.41□□□□□ -1.7
CBWD1-216ENST00000489272 LAYNQ6UX15 382 aa4.41□□□□□ -1.7
CBWD1-216ENST00000489272 USP45Q70EL2 814 aa4.41□□□□□ -1.7
CBWD1-216ENST00000489272 NEK8Q86SG6 692 aa4.41□□□□□ -1.7
CBWD1-216ENST00000489272 DTX2Q86UW9 622 aa4.41□□□□□ -1.7
CBWD1-216ENST00000489272 PPP1R3BQ86XI6 285 aa4.41□□□□□ -1.7
CBWD1-216ENST00000489272 FAM46DQ8NEK8 389 aa4.41□□□□□ -1.7
CBWD1-216ENST00000489272 BRIX1Q8TDN6 353 aaKnown RBP4.41□□□□□ -1.7
CBWD1-216ENST00000489272 SLC46A1Q96NT5 459 aa4.41□□□□□ -1.7
CBWD1-216ENST00000489272 TTYH3Q9C0H2 523 aa4.41□□□□□ -1.7
CBWD1-216ENST00000489272 HESX1Q9UBX0 185 aa4.41□□□□□ -1.7
CBWD1-216ENST00000489272 SH2B3Q9UQQ2 575 aa4.41□□□□□ -1.7
CBWD1-216ENST00000489272 SBNO2Q9Y2G9 1366 aa4.4□□□□□ -1.7
CBWD1-216ENST00000489272 SMIM22K7EJ46 135 aa4.4□□□□□ -1.71
CBWD1-216ENST00000489272 ZNF213O14771 459 aa4.4□□□□□ -1.71
CBWD1-216ENST00000489272 LATS1O95835 1130 aa4.4□□□□□ -1.71
CBWD1-216ENST00000489272 IL6RP08887 468 aaPredicted RBP4.4□□□□□ -1.71
CBWD1-216ENST00000489272 ATXN1LP0C7T5 689 aaKnown RBP4.4□□□□□ -1.71
CBWD1-216ENST00000489272 PPIFP30405 207 aaKnown RBP4.4□□□□□ -1.71
CBWD1-216ENST00000489272 CYP2C18P33260 490 aa4.4□□□□□ -1.71
CBWD1-216ENST00000489272 PTGER1P34995 402 aa4.4□□□□□ -1.71
CBWD1-216ENST00000489272 CLCN2P51788 898 aa4.4□□□□□ -1.71
CBWD1-216ENST00000489272 MAP2K6P52564 334 aa4.4□□□□□ -1.71
CBWD1-216ENST00000489272 ZNF134P52741 427 aa4.4□□□□□ -1.71
CBWD1-216ENST00000489272 LOXL3P58215 753 aa4.4□□□□□ -1.71
CBWD1-216ENST00000489272 EVA1CP58658 441 aa4.4□□□□□ -1.71
CBWD1-216ENST00000489272 FHL1Q13642 323 aa4.4□□□□□ -1.71
CBWD1-216ENST00000489272 BOP1Q14137 746 aaKnown RBP4.4□□□□□ -1.71
CBWD1-216ENST00000489272 PGS1Q32NB8 556 aa4.4□□□□□ -1.71
CBWD1-216ENST00000489272 LONRF3Q496Y0 759 aa4.4□□□□□ -1.71
CBWD1-216ENST00000489272 CCDC157Q569K6 752 aa4.4□□□□□ -1.71
CBWD1-216ENST00000489272 TREML2Q5T2D2 321 aa4.4□□□□□ -1.71
CBWD1-216ENST00000489272 PRAMEF17Q5VTA0 474 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms