RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 NUDT5Q9UKK9 219 aa9.03□□□□□ -0.96
TRAPPC12-221ENST00000489032 TBX21Q9UL17 535 aa9.03□□□□□ -0.96
TRAPPC12-221ENST00000489032 Q9Y3F1 56 aa9.03□□□□□ -0.96
TRAPPC12-221ENST00000489032 MTCH2Q9Y6C9 303 aa9.03□□□□□ -0.96
TRAPPC12-221ENST00000489032 DDX49Q9Y6V7 483 aaKnown RBP9.03□□□□□ -0.96
TRAPPC12-221ENST00000489032 LCTP09848 1927 aa9.03□□□□□ -0.96
TRAPPC12-221ENST00000489032 TRANK1O15050 2925 aa9.03□□□□□ -0.96
TRAPPC12-221ENST00000489032 MROH7Q68CQ1 1323 aa9.03□□□□□ -0.96
TRAPPC12-221ENST00000489032 PRRC2BQ5JSZ5 2229 aaKnown RBP9.03□□□□□ -0.96
TRAPPC12-221ENST00000489032 MCM3APO60318 1980 aa9.03□□□□□ -0.96
TRAPPC12-221ENST00000489032 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 MAFGO15525 162 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 DTNBO60941 627 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 PGK1P00558 417 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 GH1P01241 217 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 FGBP02675 491 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 MMP1P03956 469 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 GLI1P08151 1106 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 GNAT1P11488 350 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 MYCLP1P12525 358 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 PDCP20941 246 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 GJB2P29033 226 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 CPT1AP50416 773 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 SPIRE1Q08AE8 756 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 TMEM62Q0P6H9 643 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 CUL4AQ13619 759 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 NEDD9Q14511 834 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 NONOQ15233 471 aaKnown RBP eCLIP9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 FYB2Q5VWT5 728 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 KRT40Q6A162 431 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 EP400NLQ6ZTU2 488 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 DDX53Q86TM3 631 aaKnown RBP9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 TLK2Q86UE8 772 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 GIMAP8Q8ND71 665 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 PLEKHO2Q8TD55 490 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 FBXW5Q969U6 566 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 NAP1L4Q99733 375 aaKnown RBP9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 IPPKQ9H8X2 491 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 CD320Q9NPF0 282 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 JADE2Q9NQC1 790 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 CATSPERZQ9NTU4 200 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 TCEAL9Q9UHQ7 104 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 FBXL7Q9UJT9 491 aa9.02□□□□□ -0.97
TRAPPC12-221ENST00000489032 TCRBV16S1A1N1A0A5B0 115 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 ANKRD62A6NC57 917 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 ARVCFO00192 962 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 KRIT1O00522 736 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 MAFKO60675 156 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 NTRK1P04629 796 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 CYP3A4P08684 503 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 JUNBP17275 347 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 NCLP19338 710 aaKnown RBP9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 ICAM3P32942 547 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 RABGGTBP53611 331 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 GJA9P57773 515 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 MRPS9P82933 396 aaKnown RBP9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 SETQ01105 290 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 GUCY1B3Q02153 619 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 MTMR1Q13613 665 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 LY6KQ17RY6 165 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 CEP55Q53EZ4 464 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 LRRTM3Q86VH5 581 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 DIS3L2Q8IYB7 885 aaKnown RBP9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 AHI1Q8N157 1196 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 FBXO18Q8NFZ0 1043 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 TBCKQ8TEA7 893 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 INTS4Q96HW7 963 aaKnown RBP9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 SCLYQ96I15 445 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 INPP4AQ96PE3 977 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 MXRA8Q9BRK3 442 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 JAM3Q9BX67 310 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 MLXIPQ9HAP2 919 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 IL23AQ9NPF7 189 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 GJB4Q9NTQ9 266 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 PPARGC1AQ9UBK2 798 aaKnown RBP9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 NUB1Q9Y5A7 615 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 TNPO3Q9Y5L0 923 aaKnown RBP9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 UBIAD1Q9Y5Z9 338 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 X6R8D5 127 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 SYNRGQ9UMZ2 1314 aa9.01□□□□□ -0.97
TRAPPC12-221ENST00000489032 OR14I1A6ND48 311 aa9□□□□□ -0.97
TRAPPC12-221ENST00000489032 RFXAPO00287 272 aa9□□□□□ -0.97
TRAPPC12-221ENST00000489032 KPNA6O60684 536 aa9□□□□□ -0.97
TRAPPC12-221ENST00000489032 DNAJC8O75937 253 aaPredicted RBP9□□□□□ -0.97
TRAPPC12-221ENST00000489032 CABYRO75952 493 aa9□□□□□ -0.97
TRAPPC12-221ENST00000489032 GGPS1O95749 300 aa9□□□□□ -0.97
TRAPPC12-221ENST00000489032 CST5P28325 142 aaPredicted RBP9□□□□□ -0.97
TRAPPC12-221ENST00000489032 DNM2P50570 870 aa9□□□□□ -0.97
TRAPPC12-221ENST00000489032 ACLYP53396 1101 aa9□□□□□ -0.97
TRAPPC12-221ENST00000489032 NR1I3Q14994 352 aa9□□□□□ -0.97
TRAPPC12-221ENST00000489032 CRY1Q16526 586 aa9□□□□□ -0.97
TRAPPC12-221ENST00000489032 FSCN1Q16658 493 aaKnown RBP9□□□□□ -0.97
TRAPPC12-221ENST00000489032 TM4SF20Q53R12 229 aa9□□□□□ -0.97
TRAPPC12-221ENST00000489032 CCDC62Q6P9F0 684 aa9□□□□□ -0.97
TRAPPC12-221ENST00000489032 PAQR3Q6TCH7 311 aa9□□□□□ -0.97
TRAPPC12-221ENST00000489032 PIK3AP1Q6ZUJ8 805 aa9□□□□□ -0.97
TRAPPC12-221ENST00000489032 NIPA1Q7RTP0 329 aa9□□□□□ -0.97
TRAPPC12-221ENST00000489032 NEK8Q86SG6 692 aa9□□□□□ -0.97
TRAPPC12-221ENST00000489032 PLA2G4DQ86XP0 818 aa9□□□□□ -0.97
TRAPPC12-221ENST00000489032 DCP2Q8IU60 420 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms