RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 CASD1Q96PB1 797 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 LHX5Q9H2C1 402 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 YY1AP1Q9H869 796 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 CTTNBP2NLQ9P2B4 639 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 KANSL3Q9P2N6 904 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 DNAJB4Q9UDY4 337 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 CNOT8Q9UFF9 292 aaKnown RBP11.59□□□□□ -0.55
COL21A1-211ENST00000488912 CYTH4Q9UIA0 394 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 CEP83Q9Y592 693 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 TIMM13Q9Y5L4 95 aaPredicted RBP11.59□□□□□ -0.55
COL21A1-211ENST00000488912 KIAA0355O15063 1070 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 FTCDO95954 541 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 CSF2RAP15509 400 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 CAPN2P17655 700 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 MMP8P22894 467 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 RFC2P35250 354 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 CNGA2Q16280 664 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 IFI16Q16666 785 aaKnown RBP11.58□□□□□ -0.56
COL21A1-211ENST00000488912 PPP1R26Q5T8A7 1209 aaPredicted RBP11.58□□□□□ -0.56
COL21A1-211ENST00000488912 UBE2Q1Q7Z7E8 422 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 PHLDB2Q86SQ0 1253 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 NUP85Q9BW27 656 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 ZNF518BQ9C0D4 1074 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 ADAM22Q9P0K1 906 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 HCSTQ9UBK5 93 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 TSPAN16Q9UKR8 245 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 KIAA1257Q9ULG3 409 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 JRKLQ9Y4A0 524 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 GABRDO14764 452 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 BUB1BO60566 1050 aaPredicted RBP11.58□□□□□ -0.56
COL21A1-211ENST00000488912 RAG1P15918 1043 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 ACAT1P24752 427 aaKnown RBP11.58□□□□□ -0.56
COL21A1-211ENST00000488912 PSMC1P62191 440 aaKnown RBP11.58□□□□□ -0.56
COL21A1-211ENST00000488912 C1QBPQ07021 282 aaKnown RBP11.58□□□□□ -0.56
COL21A1-211ENST00000488912 IKBKEQ14164 716 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 TCEAL1Q15170 157 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 CCDC142Q17RM4 750 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 GOLGA7BQ2TAP0 167 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 DCLRE1AQ6PJP8 1040 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 LCLAT1Q6UWP7 414 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 NPAS4Q8IUM7 802 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 CRYBG2Q8N1P7 616 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 TRIM11Q96F44 468 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 VWA8A3KMH1 1905 aa11.58□□□□□ -0.56
COL21A1-211ENST00000488912 COL4A6Q14031 1691 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 NCK2O43639 380 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 MYBL1P10243 752 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 ODC1P11926 461 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 CCDC130P13994 396 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 OR1G1P47890 313 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 HADHBP55084 474 aaKnown RBP11.57□□□□□ -0.56
COL21A1-211ENST00000488912 AMPD2Q01433 879 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 PTPROQ16827 1216 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 PTPN20Q4JDL3 420 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 PPP1R2P3Q6NXS1 205 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 TMEM86AQ8N2M4 240 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 B3GALNT2Q8NCR0 500 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 UBA3Q8TBC4 463 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 ZNF564Q8TBZ8 553 aaPredicted RBP11.57□□□□□ -0.56
COL21A1-211ENST00000488912 RSPH1Q8WYR4 309 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 VCPIP1Q96JH7 1222 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 FAM193BQ96PV7 902 aaPredicted RBP11.57□□□□□ -0.56
COL21A1-211ENST00000488912 L2HGDHQ9H9P8 463 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 AVENQ9NQS1 362 aaPredicted RBP11.57□□□□□ -0.56
COL21A1-211ENST00000488912 DDX43Q9NXZ2 648 aaKnown RBP11.57□□□□□ -0.56
COL21A1-211ENST00000488912 PRG3Q9Y2Y8 225 aaPredicted RBP11.57□□□□□ -0.56
COL21A1-211ENST00000488912 M0QZQ0 153 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 HOXA2O43364 376 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 ATP2C2O75185 946 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 MTA2O94776 668 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 UPP2O95045 317 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 FAM163BP0C2L3 166 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 GPD2P43304 727 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 STILQ15468 1287 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 KIAA0319Q5VV43 1072 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 DAAM2Q86T65 1068 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 TTC30AQ86WT1 665 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 ERICH1Q86X53 443 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 TNIP3Q96KP6 325 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 CPXM1Q96SM3 734 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 TLR10Q9BXR5 811 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 NRDE2Q9H7Z3 1164 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 FAM53CQ9NYF3 392 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 UVRAGQ9P2Y5 699 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 TJP2Q9UDY2 1190 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 PACSIN2Q9UNF0 486 aaPredicted RBP11.57□□□□□ -0.56
COL21A1-211ENST00000488912 MRFAP1Q9Y605 127 aa11.57□□□□□ -0.56
COL21A1-211ENST00000488912 PTPRSQ13332 1948 aa11.56□□□□□ -0.56
COL21A1-211ENST00000488912 TBKBP1A7MCY6 615 aa11.56□□□□□ -0.56
COL21A1-211ENST00000488912 PFKMP08237 780 aa11.56□□□□□ -0.56
COL21A1-211ENST00000488912 LHX1P48742 406 aa11.56□□□□□ -0.56
COL21A1-211ENST00000488912 PDCLQ13371 301 aa11.56□□□□□ -0.56
COL21A1-211ENST00000488912 PKDCCQ504Y2 493 aa11.56□□□□□ -0.56
COL21A1-211ENST00000488912 CYP4A22Q5TCH4 519 aa11.56□□□□□ -0.56
COL21A1-211ENST00000488912 LIN9Q5TKA1 542 aa11.56□□□□□ -0.56
COL21A1-211ENST00000488912 PAPD7Q5XG87 772 aaKnown RBP11.56□□□□□ -0.56
COL21A1-211ENST00000488912 ARHGAP17Q68EM7 881 aa11.56□□□□□ -0.56
COL21A1-211ENST00000488912 MFSD5Q6N075 450 aa11.56□□□□□ -0.56
COL21A1-211ENST00000488912 SLFN11Q7Z7L1 901 aa11.56□□□□□ -0.56
COL21A1-211ENST00000488912 BTBD6Q96KE9 485 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms