RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 GDAP2Q9NXN4 497 aa27.95■■■□□ 2.06
RNF220-216ENST00000488865 TULP1O00294 542 aaPredicted RBP27.94■■■□□ 2.06
RNF220-216ENST00000488865 KIAA0391O15091 583 aaKnown RBP27.94■■■□□ 2.06
RNF220-216ENST00000488865 PRPF40AO75400 957 aaKnown RBP27.94■■■□□ 2.06
RNF220-216ENST00000488865 NASPP49321 788 aaPredicted RBP27.94■■■□□ 2.06
RNF220-216ENST00000488865 RBP5P82980 135 aa27.94■■■□□ 2.06
RNF220-216ENST00000488865 WDR44Q5JSH3 913 aa27.94■■■□□ 2.06
RNF220-216ENST00000488865 TTC8Q8TAM2 541 aa27.94■■■□□ 2.06
RNF220-216ENST00000488865 DDX43Q9NXZ2 648 aaKnown RBP27.94■■■□□ 2.06
RNF220-216ENST00000488865 DENND4CQ5VZ89 1909 aa27.94■■■□□ 2.06
RNF220-216ENST00000488865 GOLGA8IPA6NC78 632 aa27.93■■■□□ 2.06
RNF220-216ENST00000488865 GOLGA8JA6NMD2 632 aa27.93■■■□□ 2.06
RNF220-216ENST00000488865 PRPF6O94906 941 aaKnown RBP27.93■■■□□ 2.06
RNF220-216ENST00000488865 CSH1P0DML2 217 aa27.93■■■□□ 2.06
RNF220-216ENST00000488865 CSH2P0DML3 217 aa27.93■■■□□ 2.06
RNF220-216ENST00000488865 MYL7Q01449 175 aa27.93■■■□□ 2.06
RNF220-216ENST00000488865 TNK2Q07912 1038 aa27.93■■■□□ 2.06
RNF220-216ENST00000488865 BFSP1Q12934 665 aa27.93■■■□□ 2.06
RNF220-216ENST00000488865 ITPRIPL2Q3MIP1 535 aa27.93■■■□□ 2.06
RNF220-216ENST00000488865 INTS6LQ5JSJ4 861 aaKnown RBP27.93■■■□□ 2.06
RNF220-216ENST00000488865 STXBP4Q6ZWJ1 553 aa27.93■■■□□ 2.06
RNF220-216ENST00000488865 GPD1LQ8N335 351 aa27.93■■■□□ 2.06
RNF220-216ENST00000488865 SYNPOQ8N3V7 929 aa27.93■■■□□ 2.06
RNF220-216ENST00000488865 PI4K2AQ9BTU6 479 aa27.93■■■□□ 2.06
RNF220-216ENST00000488865 LRRC27Q9C0I9 530 aa27.93■■■□□ 2.06
RNF220-216ENST00000488865 SMG9Q9H0W8 520 aaKnown RBP27.93■■■□□ 2.06
RNF220-216ENST00000488865 PCIF1Q9H4Z3 704 aa27.93■■■□□ 2.06
RNF220-216ENST00000488865 PDE11AQ9HCR9 933 aa27.93■■■□□ 2.06
RNF220-216ENST00000488865 GMEB2Q9UKD1 530 aa27.93■■■□□ 2.06
RNF220-216ENST00000488865 RAB23Q9ULC3 237 aa27.93■■■□□ 2.06
RNF220-216ENST00000488865 STX6O43752 255 aa27.92■■■□□ 2.06
RNF220-216ENST00000488865 SDHBP21912 280 aa27.92■■■□□ 2.06
RNF220-216ENST00000488865 AVPR1AP37288 418 aa27.92■■■□□ 2.06
RNF220-216ENST00000488865 RPL10AP62906 217 aaKnown RBP27.92■■■□□ 2.06
RNF220-216ENST00000488865 PON2Q15165 354 aa27.92■■■□□ 2.06
RNF220-216ENST00000488865 TOP6BLQ8N6T0 577 aa27.92■■■□□ 2.06
RNF220-216ENST00000488865 PDILTQ8N807 584 aa27.92■■■□□ 2.06
RNF220-216ENST00000488865 MAB21L3Q8N8X9 362 aa27.92■■■□□ 2.06
RNF220-216ENST00000488865 TNMDQ9H2S6 317 aa27.92■■■□□ 2.06
RNF220-216ENST00000488865 KIF9Q9HAQ2 790 aa27.92■■■□□ 2.06
RNF220-216ENST00000488865 KIF26AQ9ULI4 1882 aaPredicted RBP27.91■■■□□ 2.06
RNF220-216ENST00000488865 TMEM191BP0C7N4 346 aa27.91■■■□□ 2.06
RNF220-216ENST00000488865 LHX1P48742 406 aa27.91■■■□□ 2.06
RNF220-216ENST00000488865 GPR15P49685 360 aa27.91■■■□□ 2.06
RNF220-216ENST00000488865 CCINQ13939 588 aa27.91■■■□□ 2.06
RNF220-216ENST00000488865 STK38Q15208 465 aa27.91■■■□□ 2.06
RNF220-216ENST00000488865 RSPO4Q2I0M5 234 aaPredicted RBP27.91■■■□□ 2.06
RNF220-216ENST00000488865 Q6ZS52 159 aa27.91■■■□□ 2.06
RNF220-216ENST00000488865 LINC00301Q8NCQ3 95 aa27.91■■■□□ 2.06
RNF220-216ENST00000488865 MRPS31Q92665 395 aaKnown RBP27.91■■■□□ 2.06
RNF220-216ENST00000488865 PKMYT1Q99640 499 aa27.91■■■□□ 2.06
RNF220-216ENST00000488865 FAM83CQ9BQN1 747 aa27.91■■■□□ 2.06
RNF220-216ENST00000488865 MTMR12Q9C0I1 747 aa27.91■■■□□ 2.06
RNF220-216ENST00000488865 GKN1Q9NS71 199 aa27.91■■■□□ 2.06
RNF220-216ENST00000488865 UXTQ9UBK9 157 aaPredicted RBP27.91■■■□□ 2.06
RNF220-216ENST00000488865 SIX4Q9UIU6 781 aa27.91■■■□□ 2.06
RNF220-216ENST00000488865 SNX9Q9Y5X1 595 aa27.91■■■□□ 2.06
RNF220-216ENST00000488865 K7ESF4 209 aa27.9■■■□□ 2.06
RNF220-216ENST00000488865 GABRDO14764 452 aa27.9■■■□□ 2.06
RNF220-216ENST00000488865 KRT19P08727 400 aa27.9■■■□□ 2.06
RNF220-216ENST00000488865 TGM1P22735 817 aa27.9■■■□□ 2.06
RNF220-216ENST00000488865 CNR2P34972 360 aa27.9■■■□□ 2.06
RNF220-216ENST00000488865 LMNB2Q03252 620 aa27.9■■■□□ 2.06
RNF220-216ENST00000488865 SURF1Q15526 300 aa27.9■■■□□ 2.06
RNF220-216ENST00000488865 SCARA3Q6AZY7 606 aa27.9■■■□□ 2.06
RNF220-216ENST00000488865 LAIR1Q6GTX8 287 aa27.9■■■□□ 2.06
RNF220-216ENST00000488865 MON1AQ86VX9 555 aa27.9■■■□□ 2.06
RNF220-216ENST00000488865 NOC3LQ8WTT2 800 aaKnown RBP27.9■■■□□ 2.06
RNF220-216ENST00000488865 USP13Q92995 863 aaPredicted RBP27.9■■■□□ 2.06
RNF220-216ENST00000488865 ANKRD36BP1Q96IX9 119 aa27.9■■■□□ 2.06
RNF220-216ENST00000488865 CUEDC2Q9H467 287 aa27.9■■■□□ 2.06
RNF220-216ENST00000488865 TDP1Q9NUW8 608 aa27.9■■■□□ 2.06
RNF220-216ENST00000488865 INTS13Q9NVM9 706 aa27.9■■■□□ 2.06
RNF220-216ENST00000488865 MAGED2Q9UNF1 606 aaPredicted RBP27.9■■■□□ 2.06
RNF220-216ENST00000488865 PRR5-ARHGAP8B1AHC4 643 aa27.89■■■□□ 2.06
RNF220-216ENST00000488865 ACAT1P24752 427 aaKnown RBP27.89■■■□□ 2.06
RNF220-216ENST00000488865 PCSK1P29120 753 aa27.89■■■□□ 2.06
RNF220-216ENST00000488865 ARHGAP8P85298 464 aa27.89■■■□□ 2.06
RNF220-216ENST00000488865 MYO1EQ12965 1108 aa27.89■■■□□ 2.06
RNF220-216ENST00000488865 ZNF268Q14587 947 aaPredicted RBP27.89■■■□□ 2.06
RNF220-216ENST00000488865 TXNDC8Q6A555 127 aa27.89■■■□□ 2.06
RNF220-216ENST00000488865 DPH6Q7L8W6 267 aa27.89■■■□□ 2.06
RNF220-216ENST00000488865 LONP2Q86WA8 852 aa27.89■■■□□ 2.06
RNF220-216ENST00000488865 OSTM1Q86WC4 334 aa27.89■■■□□ 2.06
RNF220-216ENST00000488865 ADGRF2Q8IZF7 708 aa27.89■■■□□ 2.06
RNF220-216ENST00000488865 TRMT2BQ96GJ1 504 aaKnown RBP27.89■■■□□ 2.06
RNF220-216ENST00000488865 FAM84AQ96KN4 292 aa27.89■■■□□ 2.06
RNF220-216ENST00000488865 MYRFLQ96LU7 910 aa27.89■■■□□ 2.06
RNF220-216ENST00000488865 KBTBD4Q9NVX7 518 aa27.89■■■□□ 2.06
RNF220-216ENST00000488865 GTF3C4Q9UKN8 822 aa27.89■■■□□ 2.06
RNF220-216ENST00000488865 CCL26Q9Y258 94 aa27.89■■■□□ 2.06
RNF220-216ENST00000488865 R3HCC1Q9Y3T6 440 aaKnown RBP27.89■■■□□ 2.06
RNF220-216ENST00000488865 ZNF233A6NK53 670 aa27.88■■■□□ 2.05
RNF220-216ENST00000488865 CHURC1-FNTBB4DL54 471 aa27.88■■■□□ 2.05
RNF220-216ENST00000488865 K7ELQ4 463 aaPredicted RBP27.88■■■□□ 2.05
RNF220-216ENST00000488865 OBSL1O75147 1896 aa27.88■■■□□ 2.05
RNF220-216ENST00000488865 PPP6R2O75170 966 aa27.88■■■□□ 2.05
RNF220-216ENST00000488865 NOL4O94818 638 aa27.88■■■□□ 2.05
RNF220-216ENST00000488865 CYP2F1P24903 491 aa27.88■■■□□ 2.05
RNF220-216ENST00000488865 HOXA6P31267 233 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms