RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 SGSM3Q96HU1 749 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 PIWIL1Q96J94 861 aaKnown RBP13.37□□□□□ -0.27
CLIC4-202ENST00000488683 TMEM237Q96Q45 408 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 INO80BQ9C086 356 aaPredicted RBP13.37□□□□□ -0.27
CLIC4-202ENST00000488683 EURLQ9NYK6 297 aa13.37□□□□□ -0.27
CLIC4-202ENST00000488683 USP15Q9Y4E8 981 aaPredicted RBP13.37□□□□□ -0.27
CLIC4-202ENST00000488683 F5H423 210 aaPredicted RBP13.36□□□□□ -0.27
CLIC4-202ENST00000488683 IGF2BP3O00425 579 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLIC4-202ENST00000488683 PTPRFP10586 1907 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 GHRP10912 638 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 YY1P25490 414 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 CAV1Q03135 178 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 LAMTOR4Q0VGL1 99 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 CDO1Q16878 200 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 BRSK2Q8IWQ3 736 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 NETO2Q8NC67 525 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 UBA3Q8TBC4 463 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 SLC12A4Q9UP95 1085 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 ANK1P16157 1881 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 BPTFQ12830 3046 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 AVILO75366 819 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 KRT16P08779 473 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 ABCD1P33897 745 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 NCALDP61601 193 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 OTUD4Q01804 1114 aaKnown RBP13.36□□□□□ -0.27
CLIC4-202ENST00000488683 XRCC4Q13426 336 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 SLC1A5Q15758 541 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 FBXO16Q8IX29 292 aaPredicted RBP13.36□□□□□ -0.27
CLIC4-202ENST00000488683 CKAP2Q8WWK9 683 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 CPXM1Q96SM3 734 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 LPIN3Q9BQK8 851 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 WDR83Q9BRX9 315 aaKnown RBP13.36□□□□□ -0.27
CLIC4-202ENST00000488683 MAGEB5Q9BZ81 275 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 SDCBP2Q9H190 292 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 TMEM134Q9H6X4 195 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 SMYD3Q9H7B4 428 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 PDGFCQ9NRA1 345 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 IP6K2Q9UHH9 426 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 AGTPBP1Q9UPW5 1226 aa13.36□□□□□ -0.27
CLIC4-202ENST00000488683 TCEA3O75764 348 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 TAC1P20366 129 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 PSMA2P25787 234 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 OVGP1Q12889 678 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 TRPC3Q13507 836 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 VGLL4Q14135 290 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 TFDP1Q14186 410 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 SPATA21Q7Z572 469 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 ZC3H18Q86VM9 953 aaKnown RBP13.35□□□□□ -0.27
CLIC4-202ENST00000488683 ERICH1Q86X53 443 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 ECHDC2Q86YB7 292 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 UNC45BQ8IWX7 931 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 CPB2Q96IY4 423 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 TRIM56Q9BRZ2 755 aaKnown RBP13.35□□□□□ -0.27
CLIC4-202ENST00000488683 MAK16Q9BXY0 300 aaKnown RBP13.35□□□□□ -0.27
CLIC4-202ENST00000488683 IMPG2Q9BZV3 1241 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 METTL5Q9NRN9 209 aaKnown RBP13.35□□□□□ -0.27
CLIC4-202ENST00000488683 HOXC10Q9NYD6 342 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 NR2E3Q9Y5X4 410 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 hCG_1818297A0A087WSY0 165 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 FZD9O00144 591 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 ABLIM1O14639 778 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 CST8O60676 142 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 DNAJC8O75937 253 aaPredicted RBP13.35□□□□□ -0.27
CLIC4-202ENST00000488683 ATP6V1G2O95670 118 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 PRKCBP05771 671 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 NFICP08651 508 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 POTEJP0CG39 1038 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 ZNF699Q32M78 642 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 FAXCQ5TGI0 409 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 ZCCHC9Q8N567 271 aaKnown RBP13.35□□□□□ -0.27
CLIC4-202ENST00000488683 DNERQ8NFT8 737 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 ACTL9Q8TC94 416 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 STAMBPL1Q96FJ0 436 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 CLMNQ96JQ2 1002 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 NOD2Q9HC29 1040 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 LGALS13Q9UHV8 139 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 NUMBLQ9Y6R0 609 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 PAPPA2Q9BXP8 1791 aa13.35□□□□□ -0.27
CLIC4-202ENST00000488683 DNALI1O14645 258 aaPredicted RBP13.34□□□□□ -0.27
CLIC4-202ENST00000488683 CDKN2BP42772 138 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 ASPAP45381 313 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 GPX6P59796 221 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 PPP1R15BQ5SWA1 713 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 MAML1Q92585 1016 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 P3H4Q92791 437 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 TACO1Q9BSH4 297 aaKnown RBP13.34□□□□□ -0.27
CLIC4-202ENST00000488683 GPATCH2LQ9NWQ4 482 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 LAMA3Q16787 3333 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 C2orf71A6NGG8 1288 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 ZBTB42B2RXF5 422 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 ADM5C9JUS6 153 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 CDH16O75309 829 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 MAFO75444 373 aaPredicted RBP13.34□□□□□ -0.27
CLIC4-202ENST00000488683 ERBB2P04626 1255 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 LACTBP83111 547 aaPredicted RBP13.34□□□□□ -0.27
CLIC4-202ENST00000488683 RELL1Q8IUW5 271 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 WDR49Q8IV35 697 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 IGDCC3Q8IVU1 814 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 RCOR2Q8IZ40 523 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 ALLCQ8N6M5 410 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms