RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 LOC400499M0QZD8 3231 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 CACNA1EQ15878 2313 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 SH3BP5O60239 455 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 ODC1P11926 461 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 TYMPP19971 482 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 ITPKAP23677 461 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 NMT1P30419 496 aaKnown RBP10.05□□□□□ -0.8
COL17A1-207ENST00000488320 P2RY2P41231 377 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 CRY1Q16526 586 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 RUFY3Q7L099 469 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 TMEM130Q8N3G9 435 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 MINDY1Q8N5J2 469 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 DEFB119Q8N690 84 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 FRMD1Q8N878 549 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 USP33Q8TEY7 942 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 WHAMMQ8TF30 809 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 OSCP1Q8WVF1 389 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 ADAMTS14Q8WXS8 1223 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 DRC1Q96MC2 740 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 CAMK1GQ96NX5 476 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 FNBP1Q96RU3 617 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 TRPC7Q9HCX4 862 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 POLMQ9NP87 494 aaPredicted RBP10.05□□□□□ -0.8
COL17A1-207ENST00000488320 KMT5AQ9NQR1 393 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 PILRBQ9UKJ0 227 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 MMP17Q9ULZ9 603 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 WNT6Q9Y6F9 365 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 DENND4CQ5VZ89 1909 aa10.05□□□□□ -0.8
COL17A1-207ENST00000488320 PLXNB3Q9ULL4 1909 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 K7EQS6 105 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 AP5Z1O43299 807 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 XPOTO43592 962 aaKnown RBP10.04□□□□□ -0.8
COL17A1-207ENST00000488320 DTNBO60941 627 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 CDC45O75419 566 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 F11P03951 625 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 PRB1P04280 392 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 SYPP08247 313 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 SERPINF2P08697 491 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 FTH1P19P0C7X4 201 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 ATF6P18850 670 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 RPA1P27694 616 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 LRPAP1P30533 357 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 NPTX2P47972 431 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 NLRP12P59046 1061 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 MRPS21P82921 87 aaKnown RBP10.04□□□□□ -0.8
COL17A1-207ENST00000488320 STRN3Q13033 797 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 ZNF268Q14587 947 aaPredicted RBP10.04□□□□□ -0.8
COL17A1-207ENST00000488320 BMP2KLQ5H9B9 411 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 SPDYCQ5MJ68 293 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 MON1AQ86VX9 555 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 METTL23Q86XA0 190 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 THEM5Q8N1Q8 247 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 OR2I1PQ8NGU4 316 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 OLIG1Q8TAK6 271 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 RIN3Q8TB24 985 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 HMGB4Q8WW32 186 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 WASF1Q92558 559 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 SENP8Q96LD8 212 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 MTMR9Q96QG7 549 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 BHMT2Q9H2M3 363 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 SCUBE2Q9NQ36 999 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 ABI2Q9NYB9 513 aaPredicted RBP10.04□□□□□ -0.8
COL17A1-207ENST00000488320 UBQLN1Q9UMX0 589 aaKnown RBP10.04□□□□□ -0.8
COL17A1-207ENST00000488320 APOBEC2Q9Y235 224 aaKnown RBP10.04□□□□□ -0.8
COL17A1-207ENST00000488320 RBM19Q9Y4C8 960 aaKnown RBP10.04□□□□□ -0.8
COL17A1-207ENST00000488320 CYP46A1Q9Y6A2 500 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 IGSF10Q6WRI0 2623 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 KIAA1549LQ6ZVL6 1849 aa10.04□□□□□ -0.8
COL17A1-207ENST00000488320 TNRC6BQ9UPQ9 1833 aaKnown RBP10.04□□□□□ -0.8
COL17A1-207ENST00000488320 PTPRDP23468 1912 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 FREM2Q5SZK8 3169 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 ARHGAP33O14559 1287 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 CLDN3O15551 220 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 USP17L7P0C7H9 530 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 CXCL8P10145 99 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 CD59P13987 128 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 CYP3A5P20815 502 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 PROZP22891 400 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 HOXD12P35452 270 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 TIE1P35590 1138 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 GUCY2FP51841 1108 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 RPL6Q02878 288 aaKnown RBP10.03□□□□□ -0.8
COL17A1-207ENST00000488320 FAM160A1Q05DH4 1040 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 PPP2R3AQ06190 1150 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 NOLC1Q14978 699 aaKnown RBP eCLIP10.03□□□□□ -0.8
COL17A1-207ENST00000488320 EML3Q32P44 896 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 TMEM92Q6UXU6 159 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 RABEPKQ7Z6M1 372 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 EFCAB13Q8IY85 973 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 TXNDC5Q8NBS9 432 aaKnown RBP10.03□□□□□ -0.8
COL17A1-207ENST00000488320 OR10T2Q8NGX3 314 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 SPPL2BQ8TCT7 592 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 C2orf15Q8WU43 125 aaKnown RBP10.03□□□□□ -0.8
COL17A1-207ENST00000488320 FAM212AQ96EL1 285 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 PNMA5Q96PV4 448 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 UBL7Q96S82 380 aaPredicted RBP10.03□□□□□ -0.8
COL17A1-207ENST00000488320 CYP2S1Q96SQ9 504 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 TMEM60Q9H2L4 133 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 PLEKHA5Q9HAU0 1116 aa10.03□□□□□ -0.8
COL17A1-207ENST00000488320 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms