RNA–Protein interactions for RNA: ENST00000488299.5

IDH3B-209, Transcript of isocitrate dehydrogenase 3 (NAD(+)) beta, humanhuman

TSL 2

Gene IDH3B, Length 1,620 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3B-209ENST00000488299 TNIP3Q96KP6 325 aa18.35■□□□□ 0.53
IDH3B-209ENST00000488299 NRDE2Q9H7Z3 1164 aa18.35■□□□□ 0.53
IDH3B-209ENST00000488299 M0QZQ0 153 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 GABRDO14764 452 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 BUB1O43683 1085 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 B4GALT3O60512 393 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 KIF4AO95239 1232 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 MOCS3O95396 460 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 BRCC3P46736 316 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 IFI16Q16666 785 aaKnown RBP18.34■□□□□ 0.53
IDH3B-209ENST00000488299 OSTM1Q86WC4 334 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 C12orf29Q8N999 325 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 TOP1MTQ969P6 601 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 TRIM11Q96F44 468 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 COLEC11Q9BWP8 271 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 DPEP3Q9H4B8 488 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 DNAJB4Q9UDY4 337 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 SALL4Q9UJQ4 1053 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 DSEQ9UL01 958 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.34■□□□□ 0.53
IDH3B-209ENST00000488299 NME7Q9Y5B8 376 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 TIMM13Q9Y5L4 95 aaPredicted RBP18.34■□□□□ 0.53
IDH3B-209ENST00000488299 TMEM189-UBE2V1I3L0A0 370 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 I3L4J1 428 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 O00370 1275 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 TADA2AO75478 443 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 MICAL2O94851 1124 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 MYBL1P10243 752 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 ATP2A2P16615 1042 aaKnown RBP18.34■□□□□ 0.53
IDH3B-209ENST00000488299 FAM117BQ6P1L5 589 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 DENND1BQ6P3S1 775 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 LCLAT1Q6UWP7 414 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 PHF13Q86YI8 300 aaPredicted RBP18.34■□□□□ 0.53
IDH3B-209ENST00000488299 MCOLN2Q8IZK6 566 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 SLC35F6Q8N357 371 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 TRIM58Q8NG06 486 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 SLC35G2Q8TBE7 412 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 SPATA18Q8TC71 538 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 VCPIP1Q96JH7 1222 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 SUSD3Q96L08 255 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 ALS2CR12Q96Q35 445 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 WDR24Q96S15 920 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 SLC9A7Q96T83 725 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 DDX43Q9NXZ2 648 aaKnown RBP18.34■□□□□ 0.53
IDH3B-209ENST00000488299 ADAM22Q9P0K1 906 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 FAN1Q9Y2M0 1017 aa18.34■□□□□ 0.53
IDH3B-209ENST00000488299 PRG3Q9Y2Y8 225 aaPredicted RBP18.34■□□□□ 0.53
IDH3B-209ENST00000488299 NRP1O14786 923 aa18.33■□□□□ 0.52
IDH3B-209ENST00000488299 HCRTO43612 131 aa18.33■□□□□ 0.52
IDH3B-209ENST00000488299 TRAPPC3O43617 180 aa18.33■□□□□ 0.52
IDH3B-209ENST00000488299 DGKIO75912 1065 aa18.33■□□□□ 0.52
IDH3B-209ENST00000488299 CYP11A1P05108 521 aa18.33■□□□□ 0.52
IDH3B-209ENST00000488299 ITGB1P05556 798 aa18.33■□□□□ 0.52
IDH3B-209ENST00000488299 CDH5P33151 784 aaPredicted RBP18.33■□□□□ 0.52
IDH3B-209ENST00000488299 RHOT2Q8IXI1 618 aa18.33■□□□□ 0.52
IDH3B-209ENST00000488299 LRRC43Q8N309 656 aa18.33■□□□□ 0.52
IDH3B-209ENST00000488299 WDTC1Q8N5D0 677 aa18.33■□□□□ 0.52
IDH3B-209ENST00000488299 PHOSPHO2Q8TCD6 241 aa18.33■□□□□ 0.52
IDH3B-209ENST00000488299 RFFLQ8WZ73 363 aa18.33■□□□□ 0.52
IDH3B-209ENST00000488299 ZNF653Q96CK0 615 aa18.33■□□□□ 0.52
IDH3B-209ENST00000488299 TMEM175Q9BSA9 504 aa18.33■□□□□ 0.52
IDH3B-209ENST00000488299 NCANO14594 1321 aa18.32■□□□□ 0.52
IDH3B-209ENST00000488299 F8W810 466 aa18.32■□□□□ 0.52
IDH3B-209ENST00000488299 M0QYV0 167 aa18.32■□□□□ 0.52
IDH3B-209ENST00000488299 PTPN1P18031 435 aaKnown RBP18.32■□□□□ 0.52
IDH3B-209ENST00000488299 RABGGTBP53611 331 aa18.32■□□□□ 0.52
IDH3B-209ENST00000488299 LRIT3Q3SXY7 679 aa18.32■□□□□ 0.52
IDH3B-209ENST00000488299 PPP1R26Q5T8A7 1209 aaPredicted RBP18.32■□□□□ 0.52
IDH3B-209ENST00000488299 LIN9Q5TKA1 542 aa18.32■□□□□ 0.52
IDH3B-209ENST00000488299 ARHGAP17Q68EM7 881 aa18.32■□□□□ 0.52
IDH3B-209ENST00000488299 ERICH1Q86X53 443 aa18.32■□□□□ 0.52
IDH3B-209ENST00000488299 HERC6Q8IVU3 1022 aa18.32■□□□□ 0.52
IDH3B-209ENST00000488299 C1orf131Q8NDD1 294 aaKnown RBP18.32■□□□□ 0.52
IDH3B-209ENST00000488299 ARHGEF26Q96DR7 871 aa18.32■□□□□ 0.52
IDH3B-209ENST00000488299 CALR3Q96L12 384 aaKnown RBP18.32■□□□□ 0.52
IDH3B-209ENST00000488299 FAM49BQ9NUQ9 324 aa18.32■□□□□ 0.52
IDH3B-209ENST00000488299 CTTNBP2NLQ9P2B4 639 aa18.32■□□□□ 0.52
IDH3B-209ENST00000488299 HESX1Q9UBX0 185 aa18.32■□□□□ 0.52
IDH3B-209ENST00000488299 CNOT8Q9UFF9 292 aaKnown RBP18.32■□□□□ 0.52
IDH3B-209ENST00000488299 GTF3C4Q9UKN8 822 aa18.32■□□□□ 0.52
IDH3B-209ENST00000488299 TSPAN16Q9UKR8 245 aa18.32■□□□□ 0.52
IDH3B-209ENST00000488299 PCDHB8Q9UN66 801 aa18.32■□□□□ 0.52
IDH3B-209ENST00000488299 TRIOBPQ9H2D6 2365 aa18.32■□□□□ 0.52
IDH3B-209ENST00000488299 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.31■□□□□ 0.52
IDH3B-209ENST00000488299 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.31■□□□□ 0.52
IDH3B-209ENST00000488299 CYP1A2P05177 515 aa18.31■□□□□ 0.52
IDH3B-209ENST00000488299 TYMPP19971 482 aa18.31■□□□□ 0.52
IDH3B-209ENST00000488299 ACAT1P24752 427 aaKnown RBP18.31■□□□□ 0.52
IDH3B-209ENST00000488299 C1QBPQ07021 282 aaKnown RBP18.31■□□□□ 0.52
IDH3B-209ENST00000488299 GOLGA7BQ2TAP0 167 aa18.31■□□□□ 0.52
IDH3B-209ENST00000488299 THEM5Q8N1Q8 247 aa18.31■□□□□ 0.52
IDH3B-209ENST00000488299 B3GALNT2Q8NCR0 500 aa18.31■□□□□ 0.52
IDH3B-209ENST00000488299 UBA3Q8TBC4 463 aa18.31■□□□□ 0.52
IDH3B-209ENST00000488299 CTAGE9A4FU28 777 aa18.31■□□□□ 0.52
IDH3B-209ENST00000488299 SOX1O00570 391 aaPredicted RBP18.31■□□□□ 0.52
IDH3B-209ENST00000488299 CALB1P05937 261 aa18.31■□□□□ 0.52
IDH3B-209ENST00000488299 MMP8P22894 467 aa18.31■□□□□ 0.52
IDH3B-209ENST00000488299 PCSK1P29120 753 aa18.31■□□□□ 0.52
IDH3B-209ENST00000488299 PBX2P40425 430 aa18.31■□□□□ 0.52
IDH3B-209ENST00000488299 SLC11A1P49279 550 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms