RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 CDK11BP21127 795 aaKnown RBP11.79□□□□□ -0.52
UBE4B-210ENST00000488228 NDST1P52848 882 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 EXOC3L4Q17RC7 722 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 TPGS2Q68CL5 300 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 GJB7Q6PEY0 223 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 GBP6Q6ZN66 633 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 RRAGAQ7L523 313 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 ACOT1Q86TX2 421 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 DCP1BQ8IZD4 617 aaKnown RBP11.79□□□□□ -0.52
UBE4B-210ENST00000488228 UBR7Q8N806 425 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 B3GALNT2Q8NCR0 500 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 SMRP1Q8NCR6 262 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 RNF214Q8ND24 703 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 EHBP1Q8NDI1 1231 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 SEPT5Q99719 369 aaPredicted RBP11.79□□□□□ -0.52
UBE4B-210ENST00000488228 ELOVL4Q9GZR5 314 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 PLEKHA4Q9H4M7 779 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 CYP3A43Q9HB55 503 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 SIX2Q9NPC8 291 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 CISHQ9NSE2 258 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 AJAP1Q9UKB5 411 aaPredicted RBP11.79□□□□□ -0.52
UBE4B-210ENST00000488228 GTF3C4Q9UKN8 822 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 CDH9Q9ULB4 789 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 COG5Q9UP83 839 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 SLC27A5Q9Y2P5 690 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 INSL5Q9Y5Q6 135 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 ANAPC1Q9H1A4 1944 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 GTPBP10A4D1E9 387 aaKnown RBP11.78□□□□□ -0.52
UBE4B-210ENST00000488228 GRXCR2A6NFK2 248 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 CCL16O15467 120 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 CILPO75339 1184 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 TPM2P07951 284 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 CCDC130P13994 396 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 PON1P27169 355 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 ELF1P32519 619 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 KLK7P49862 253 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 KCNQ1P51787 676 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 ZNF445P59923 1031 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 CYP27A1Q02318 531 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 DUSP4Q13115 394 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 PTPN21Q16825 1174 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 ZNF394Q53GI3 561 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 PPM1LQ5SGD2 360 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 PHLDB3Q6NSJ2 640 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 ELMSAN1Q6PJG2 1045 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 TCEAL8Q8IYN2 117 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 STKLD1Q8NE28 680 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 ANKRD20A12PQ8NF67 263 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 WHAMMQ8TF30 809 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 ZNF707Q96C28 371 aaPredicted RBP11.78□□□□□ -0.52
UBE4B-210ENST00000488228 PCED1BQ96HM7 432 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 KREMEN1Q96MU8 473 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 LSM14BQ9BX40 385 aaKnown RBP11.78□□□□□ -0.52
UBE4B-210ENST00000488228 FAM49BQ9NUQ9 324 aa11.78□□□□□ -0.52
UBE4B-210ENST00000488228 USP15Q9Y4E8 981 aaPredicted RBP11.78□□□□□ -0.52
UBE4B-210ENST00000488228 NUP210Q8TEM1 1887 aaPredicted RBP11.78□□□□□ -0.52
UBE4B-210ENST00000488228 HELZP42694 1942 aaKnown RBP11.78□□□□□ -0.52
UBE4B-210ENST00000488228 CAVIN2O95810 425 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 C1RP00736 705 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 HOXB8P17481 243 aaPredicted RBP11.77□□□□□ -0.53
UBE4B-210ENST00000488228 PTPN1P18031 435 aaKnown RBP11.77□□□□□ -0.53
UBE4B-210ENST00000488228 ATF6P18850 670 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 TBXAS1P24557 533 aaPredicted RBP11.77□□□□□ -0.53
UBE4B-210ENST00000488228 GPR15P49685 360 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 KCNMA1Q12791 1236 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 TWF1Q12792 350 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 SMAD4Q13485 552 aaKnown RBP11.77□□□□□ -0.53
UBE4B-210ENST00000488228 NFE2Q16621 373 aaPredicted RBP11.77□□□□□ -0.53
UBE4B-210ENST00000488228 MGAT5BQ3V5L5 792 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 LEXMQ3ZCV2 418 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 FAM171BQ6P995 826 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 CCDC149Q6ZUS6 474 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 SPATA2LQ8IUW3 424 aaPredicted RBP11.77□□□□□ -0.53
UBE4B-210ENST00000488228 MYCBPAPQ8TBZ2 947 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 HDAC7Q8WUI4 952 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 SMG7Q92540 1137 aaKnown RBP11.77□□□□□ -0.53
UBE4B-210ENST00000488228 ZNF518BQ9C0D4 1074 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 S1PR5Q9H228 398 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 KRT82Q9NSB4 513 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 ZDHHC7Q9NXF8 308 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 APEX2Q9UBZ4 518 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 DPP7Q9UHL4 492 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 PCDHB5Q9Y5E4 795 aa11.77□□□□□ -0.53
UBE4B-210ENST00000488228 NCOR1O75376 2440 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 CCDC195A0A1B0GUA6 201 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 GOLGA6L19H0YKK7 550 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 CLDN5O00501 218 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 MBTPS2O43462 519 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 CALCAP01258 141 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 LRG1P02750 347 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 FAM163BP0C2L3 166 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 PNMA6AP0CW24 399 aaPredicted RBP11.76□□□□□ -0.53
UBE4B-210ENST00000488228 IL9P15248 144 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 ACO1P21399 889 aaKnown RBP11.76□□□□□ -0.53
UBE4B-210ENST00000488228 CYP2F1P24903 491 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 CACNA2D1P54289 1103 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 RAD23BP54727 409 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 TPM4P67936 248 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 GCNT1Q02742 428 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 SYCP1Q15431 976 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms