RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 ATP2C2O75185 946 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 NOL4O94818 638 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 OR4Q2P0C623 313 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 SRGAP2BP0DMP2 458 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 ELF1P32519 619 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 GTF2F1P35269 517 aaKnown RBP eCLIP14.18□□□□□ -0.14
COL4A6-207ENST00000487645 RAD23BP54727 409 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 APBA1Q02410 837 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 IQCEQ6IPM2 695 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 GJB7Q6PEY0 223 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 C4orf50Q6ZRC1 276 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 ACOT1Q86TX2 421 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 TCEAL8Q8IYN2 117 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 KREMEN2Q8NCW0 462 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 SPPL2BQ8TCT7 592 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 SHC3Q92529 594 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 CASP10Q92851 521 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 KAT5Q92993 513 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 FUBP3Q96I24 572 aaKnown RBP eCLIP14.18□□□□□ -0.14
COL4A6-207ENST00000487645 STK33Q9BYT3 514 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 GANQ9H2C0 597 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 DPEP3Q9H4B8 488 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 ABCB6Q9NP58 842 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 CRTAC1Q9NQ79 661 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 FAM207AQ9NSI2 230 aaPredicted RBP14.18□□□□□ -0.14
COL4A6-207ENST00000487645 PCDHB5Q9Y5E4 795 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 PCDHB4Q9Y5E5 795 aa14.18□□□□□ -0.14
COL4A6-207ENST00000487645 MTMR11A4FU01 709 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 PAEPP09466 180 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 EPCAMP16422 314 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 PBX1P40424 430 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 TUFMP49411 452 aaKnown RBP14.17□□□□□ -0.14
COL4A6-207ENST00000487645 KLK7P49862 253 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 ADCY1Q08828 1119 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 ARHGAP44Q17R89 818 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 CFAP221Q4G0U5 840 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 TMEM270Q6UE05 265 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 CCDC149Q6ZUS6 474 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 MICALL1Q8N3F8 863 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 SLC4A11Q8NBS3 891 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 PABPC5Q96DU9 382 aaKnown RBP14.17□□□□□ -0.14
COL4A6-207ENST00000487645 HEXIM2Q96MH2 286 aaKnown RBP14.17□□□□□ -0.14
COL4A6-207ENST00000487645 TWNKQ96RR1 684 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 NUP58Q9BVL2 599 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 EDEM3Q9BZQ6 932 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 XPO4Q9C0E2 1151 aaKnown RBP14.17□□□□□ -0.14
COL4A6-207ENST00000487645 ELOVL4Q9GZR5 314 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 TMLHEQ9NVH6 421 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 DZANK1Q9NVP4 752 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 FBXW11Q9UKB1 542 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 GREB1Q4ZG55 1949 aa14.17□□□□□ -0.14
COL4A6-207ENST00000487645 PRUNE2Q8WUY3 3088 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.16□□□□□ -0.14
COL4A6-207ENST00000487645 RNF225M0QZC1 329 aaPredicted RBP14.16□□□□□ -0.14
COL4A6-207ENST00000487645 FOXN3O00409 490 aaPredicted RBP14.16□□□□□ -0.14
COL4A6-207ENST00000487645 PRRG1O14668 218 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 PAPLNO95428 1278 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 SEC24AO95486 1093 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 VNN2O95498 520 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 GLP2RO95838 553 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 SPATA31D3P0C874 917 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 VDRP11473 427 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 HOXB8P17481 243 aaPredicted RBP14.16□□□□□ -0.14
COL4A6-207ENST00000487645 HOXA9P31269 272 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 MAGEA11P43364 429 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 POLR2FP61218 127 aaKnown RBP14.16□□□□□ -0.14
COL4A6-207ENST00000487645 PSMC1P62191 440 aaKnown RBP14.16□□□□□ -0.14
COL4A6-207ENST00000487645 DUSP4Q13115 394 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 DRAP1Q14919 205 aaPredicted RBP14.16□□□□□ -0.14
COL4A6-207ENST00000487645 CCDC85BQ15834 202 aaPredicted RBP14.16□□□□□ -0.14
COL4A6-207ENST00000487645 ZNF394Q53GI3 561 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 FIGNQ5HY92 759 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 MDH1BQ5I0G3 518 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 LLGL2Q6P1M3 1020 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 SPATA31D4Q6ZUB0 917 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 SPATA2LQ8IUW3 424 aaPredicted RBP14.16□□□□□ -0.14
COL4A6-207ENST00000487645 ATAD1Q8NBU5 361 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 VN1R2Q8NFZ6 395 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 IQCDQ96DY2 449 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 PCED1BQ96HM7 432 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 PGLYRP2Q96PD5 576 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 B3GNT5Q9BYG0 378 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 CYP4F11Q9HBI6 524 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 MAN1C1Q9NR34 630 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 CEP72Q9P209 647 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 HMGXB4Q9UGU5 601 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 FHOD1Q9Y613 1164 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 EYSQ5T1H1 3165 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 BRWD1Q9NSI6 2320 aa14.16□□□□□ -0.14
COL4A6-207ENST00000487645 DOCK6Q96HP0 2047 aa14.15□□□□□ -0.14
COL4A6-207ENST00000487645 ZNF638Q14966 1978 aaKnown RBP14.15□□□□□ -0.14
COL4A6-207ENST00000487645 EPHB6O15197 1021 aa14.15□□□□□ -0.14
COL4A6-207ENST00000487645 LINC01565O15544 149 aa14.15□□□□□ -0.14
COL4A6-207ENST00000487645 ZMYND10O75800 440 aa14.15□□□□□ -0.14
COL4A6-207ENST00000487645 HNRNPA1P09651 372 aaKnown RBP eCLIP14.15□□□□□ -0.14
COL4A6-207ENST00000487645 HAPLN1P10915 354 aaPredicted RBP14.15□□□□□ -0.14
COL4A6-207ENST00000487645 KRT5P13647 590 aa14.15□□□□□ -0.14
COL4A6-207ENST00000487645 ZNF132P52740 706 aa14.15□□□□□ -0.14
COL4A6-207ENST00000487645 BPIFB4P59827 614 aa14.15□□□□□ -0.14
COL4A6-207ENST00000487645 PLCB2Q00722 1185 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms