RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 MSANTD3Q96H12 275 aa25.33■■□□□ 1.65
PLOD3-215ENST00000487563 HPDLQ96IR7 371 aa25.33■■□□□ 1.65
PLOD3-215ENST00000487563 IL21Q9HBE4 155 aa25.33■■□□□ 1.65
PLOD3-215ENST00000487563 AGPAT3Q9NRZ7 376 aa25.33■■□□□ 1.65
PLOD3-215ENST00000487563 OBP2AQ9NY56 170 aa25.33■■□□□ 1.65
PLOD3-215ENST00000487563 MAGED2Q9UNF1 606 aaPredicted RBP25.33■■□□□ 1.65
PLOD3-215ENST00000487563 VPS13AQ96RL7 3174 aa25.33■■□□□ 1.65
PLOD3-215ENST00000487563 PTPRJQ12913 1337 aa25.33■■□□□ 1.64
PLOD3-215ENST00000487563 SHISA7A6NL88 538 aa25.32■■□□□ 1.64
PLOD3-215ENST00000487563 KINO60870 393 aaKnown RBP25.32■■□□□ 1.64
PLOD3-215ENST00000487563 CCNE1P24864 410 aa25.32■■□□□ 1.64
PLOD3-215ENST00000487563 CASP1P29466 404 aa25.32■■□□□ 1.64
PLOD3-215ENST00000487563 AFMP43652 599 aa25.32■■□□□ 1.64
PLOD3-215ENST00000487563 RPL10AP62906 217 aaKnown RBP25.32■■□□□ 1.64
PLOD3-215ENST00000487563 PKP1Q13835 747 aa25.32■■□□□ 1.64
PLOD3-215ENST00000487563 SNRNP35Q16560 246 aaKnown RBP25.32■■□□□ 1.64
PLOD3-215ENST00000487563 ARHGAP29Q52LW3 1261 aa25.32■■□□□ 1.64
PLOD3-215ENST00000487563 RESP18Q5W5W9 173 aa25.32■■□□□ 1.64
PLOD3-215ENST00000487563 SCARA3Q6AZY7 606 aa25.32■■□□□ 1.64
PLOD3-215ENST00000487563 WDR49Q8IV35 697 aa25.32■■□□□ 1.64
PLOD3-215ENST00000487563 CEP57L1Q8IYX8 460 aa25.32■■□□□ 1.64
PLOD3-215ENST00000487563 RDH13Q8NBN7 331 aa25.32■■□□□ 1.64
PLOD3-215ENST00000487563 FNBP1Q96RU3 617 aa25.32■■□□□ 1.64
PLOD3-215ENST00000487563 HINFPQ9BQA5 517 aa25.32■■□□□ 1.64
PLOD3-215ENST00000487563 ABCB6Q9NP58 842 aa25.32■■□□□ 1.64
PLOD3-215ENST00000487563 ZMYM5Q9UJ78 669 aa25.32■■□□□ 1.64
PLOD3-215ENST00000487563 SLC38A8A6NNN8 435 aa25.31■■□□□ 1.64
PLOD3-215ENST00000487563 ARNTLO00327 626 aa25.31■■□□□ 1.64
PLOD3-215ENST00000487563 CLIC2O15247 247 aa25.31■■□□□ 1.64
PLOD3-215ENST00000487563 PRAMEF12O95522 483 aa25.31■■□□□ 1.64
PLOD3-215ENST00000487563 CSH1P0DML2 217 aa25.31■■□□□ 1.64
PLOD3-215ENST00000487563 CSH2P0DML3 217 aa25.31■■□□□ 1.64
PLOD3-215ENST00000487563 DLATP10515 647 aaKnown RBP25.31■■□□□ 1.64
PLOD3-215ENST00000487563 GPR15P49685 360 aa25.31■■□□□ 1.64
PLOD3-215ENST00000487563 DNM1Q05193 864 aaKnown RBP25.31■■□□□ 1.64
PLOD3-215ENST00000487563 C1orf228Q6PIY5 440 aa25.31■■□□□ 1.64
PLOD3-215ENST00000487563 OSTM1Q86WC4 334 aa25.31■■□□□ 1.64
PLOD3-215ENST00000487563 SPATA2LQ8IUW3 424 aaPredicted RBP25.31■■□□□ 1.64
PLOD3-215ENST00000487563 BPIFB1Q8TDL5 484 aa25.31■■□□□ 1.64
PLOD3-215ENST00000487563 C8orf33Q9H7E9 229 aaPredicted RBP25.31■■□□□ 1.64
PLOD3-215ENST00000487563 GTF3C4Q9UKN8 822 aa25.31■■□□□ 1.64
PLOD3-215ENST00000487563 TGFB1I1O43294 461 aa25.3■■□□□ 1.64
PLOD3-215ENST00000487563 TNNI1P19237 187 aa25.3■■□□□ 1.64
PLOD3-215ENST00000487563 NLRP12P59046 1061 aa25.3■■□□□ 1.64
PLOD3-215ENST00000487563 SNRPFP62306 86 aaKnown RBP25.3■■□□□ 1.64
PLOD3-215ENST00000487563 MTAPQ13126 283 aa25.3■■□□□ 1.64
PLOD3-215ENST00000487563 SOWAHAQ2M3V2 549 aa25.3■■□□□ 1.64
PLOD3-215ENST00000487563 SDHAF4Q5VUM1 108 aa25.3■■□□□ 1.64
PLOD3-215ENST00000487563 STKLD1Q8NE28 680 aa25.3■■□□□ 1.64
PLOD3-215ENST00000487563 SCFD1Q8WVM8 642 aa25.3■■□□□ 1.64
PLOD3-215ENST00000487563 ATRIPQ8WXE1 791 aa25.3■■□□□ 1.64
PLOD3-215ENST00000487563 MRPS31Q92665 395 aaKnown RBP25.3■■□□□ 1.64
PLOD3-215ENST00000487563 ZFYVE19Q96K21 471 aa25.3■■□□□ 1.64
PLOD3-215ENST00000487563 CHRDQ9H2X0 955 aa25.3■■□□□ 1.64
PLOD3-215ENST00000487563 LMAN1LQ9HAT1 526 aa25.3■■□□□ 1.64
PLOD3-215ENST00000487563 SLC39A2Q9NP94 309 aa25.3■■□□□ 1.64
PLOD3-215ENST00000487563 THG1LQ9NWX6 298 aaKnown RBP25.3■■□□□ 1.64
PLOD3-215ENST00000487563 F5P12259 2224 aa25.3■■□□□ 1.64
PLOD3-215ENST00000487563 PVALEFA0A1B0GWK0 134 aa25.29■■□□□ 1.64
PLOD3-215ENST00000487563 CYP2F1P24903 491 aa25.29■■□□□ 1.64
PLOD3-215ENST00000487563 DDX6P26196 483 aaKnown RBP eCLIP25.29■■□□□ 1.64
PLOD3-215ENST00000487563 WEE1P30291 646 aa25.29■■□□□ 1.64
PLOD3-215ENST00000487563 AVPR1AP37288 418 aa25.29■■□□□ 1.64
PLOD3-215ENST00000487563 MLLT6P55198 1093 aaPredicted RBP25.29■■□□□ 1.64
PLOD3-215ENST00000487563 PLCB2Q00722 1185 aa25.29■■□□□ 1.64
PLOD3-215ENST00000487563 FZD5Q13467 585 aa25.29■■□□□ 1.64
PLOD3-215ENST00000487563 CUL4BQ13620 913 aa25.29■■□□□ 1.64
PLOD3-215ENST00000487563 DDR2Q16832 855 aa25.29■■□□□ 1.64
PLOD3-215ENST00000487563 DPH6Q7L8W6 267 aa25.29■■□□□ 1.64
PLOD3-215ENST00000487563 CMTM8Q8IZV2 173 aa25.29■■□□□ 1.64
PLOD3-215ENST00000487563 CELF5Q8N6W0 485 aaKnown RBP25.29■■□□□ 1.64
PLOD3-215ENST00000487563 XXYLT1Q8NBI6 393 aa25.29■■□□□ 1.64
PLOD3-215ENST00000487563 TTC8Q8TAM2 541 aa25.29■■□□□ 1.64
PLOD3-215ENST00000487563 CCDC127Q96BQ5 260 aa25.29■■□□□ 1.64
PLOD3-215ENST00000487563 MMS19Q96T76 1030 aa25.29■■□□□ 1.64
PLOD3-215ENST00000487563 IER2Q9BTL4 223 aa25.29■■□□□ 1.64
PLOD3-215ENST00000487563 SLC46A2Q9BY10 475 aa25.29■■□□□ 1.64
PLOD3-215ENST00000487563 SMG9Q9H0W8 520 aaKnown RBP25.29■■□□□ 1.64
PLOD3-215ENST00000487563 UXTQ9UBK9 157 aaPredicted RBP25.29■■□□□ 1.64
PLOD3-215ENST00000487563 PCDHGA2Q9Y5H1 932 aa25.29■■□□□ 1.64
PLOD3-215ENST00000487563 GABRDO14764 452 aa25.28■■□□□ 1.64
PLOD3-215ENST00000487563 HCRTO43612 131 aa25.28■■□□□ 1.64
PLOD3-215ENST00000487563 HMGA1P17096 107 aaKnown RBP25.28■■□□□ 1.64
PLOD3-215ENST00000487563 SOX9P48436 509 aa25.28■■□□□ 1.64
PLOD3-215ENST00000487563 EHHADHQ08426 723 aa25.28■■□□□ 1.64
PLOD3-215ENST00000487563 LRRC32Q14392 662 aa25.28■■□□□ 1.64
PLOD3-215ENST00000487563 PPP2R5DQ14738 602 aa25.28■■□□□ 1.64
PLOD3-215ENST00000487563 TSSK4Q6SA08 328 aa25.28■■□□□ 1.64
PLOD3-215ENST00000487563 TRAPPC11Q7Z392 1133 aa25.28■■□□□ 1.64
PLOD3-215ENST00000487563 SCN4BQ8IWT1 228 aa25.28■■□□□ 1.64
PLOD3-215ENST00000487563 ZNF687Q8N1G0 1237 aa25.28■■□□□ 1.64
PLOD3-215ENST00000487563 MAB21L3Q8N8X9 362 aa25.28■■□□□ 1.64
PLOD3-215ENST00000487563 LRRC3BQ96PB8 259 aa25.28■■□□□ 1.64
PLOD3-215ENST00000487563 PKMYT1Q99640 499 aa25.28■■□□□ 1.64
PLOD3-215ENST00000487563 CGRRF1Q99675 332 aa25.28■■□□□ 1.64
PLOD3-215ENST00000487563 SYT15Q9BQS2 421 aa25.28■■□□□ 1.64
PLOD3-215ENST00000487563 PRMT8Q9NR22 394 aaPredicted RBP25.28■■□□□ 1.64
PLOD3-215ENST00000487563 FANCMQ8IYD8 2048 aa25.28■■□□□ 1.64
PLOD3-215ENST00000487563 CFAP54Q96N23 3096 aa25.28■■□□□ 1.64
PLOD3-215ENST00000487563 SPECC1L-ADORA2AF8WAN1 911 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms