RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 SORCS3Q9UPU3 1222 aa19.46■□□□□ 0.71
COL1A1-207ENST00000486572 ASB3Q9Y575 518 aa19.46■□□□□ 0.71
COL1A1-207ENST00000486572 MYBPHLA2RUH7 354 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 ZNF197O14709 1029 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 ASGR2P07307 311 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 PDGFRBP09619 1106 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 ATF6P18850 670 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 EPHA5P54756 1037 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 STX17P56962 302 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 MTMR3Q13615 1198 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 VEPH1Q14D04 833 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 CCDC142Q17RM4 750 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 CFAP221Q4G0U5 840 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 PRSS36Q5K4E3 855 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 FAM171BQ6P995 826 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 C4orf50Q6ZRC1 276 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 FILIP1Q7Z7B0 1213 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 ITIH5Q86UX2 942 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 SPATA2LQ8IUW3 424 aaPredicted RBP19.45■□□□□ 0.7
COL1A1-207ENST00000486572 NPAS3Q8IXF0 933 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 HS6ST3Q8IZP7 471 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 ING5Q8WYH8 240 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 PSMG2Q969U7 264 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 FUBP3Q96I24 572 aaKnown RBP eCLIP19.45■□□□□ 0.7
COL1A1-207ENST00000486572 PI4K2AQ9BTU6 479 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 C1QTNF1Q9BXJ1 281 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 CRTAC1Q9NQ79 661 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 IGSF9Q9P2J2 1179 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 DOCK6Q96HP0 2047 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 NOTCH4Q99466 2003 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 DOCK8Q8NF50 2099 aa19.45■□□□□ 0.7
COL1A1-207ENST00000486572 A8MXQ7 604 aa19.44■□□□□ 0.7
COL1A1-207ENST00000486572 ATP2C2O75185 946 aa19.44■□□□□ 0.7
COL1A1-207ENST00000486572 MICAL2O94851 1124 aa19.44■□□□□ 0.7
COL1A1-207ENST00000486572 RAP1GAPP47736 663 aa19.44■□□□□ 0.7
COL1A1-207ENST00000486572 NOP14P78316 857 aaKnown RBP19.44■□□□□ 0.7
COL1A1-207ENST00000486572 CCDC40Q4G0X9 1142 aa19.44■□□□□ 0.7
COL1A1-207ENST00000486572 SPOPLQ6IQ16 392 aa19.44■□□□□ 0.7
COL1A1-207ENST00000486572 FRMD5Q7Z6J6 570 aa19.44■□□□□ 0.7
COL1A1-207ENST00000486572 MLKLQ8NB16 471 aa19.44■□□□□ 0.7
COL1A1-207ENST00000486572 CCDC150Q8NCX0 1101 aa19.44■□□□□ 0.7
COL1A1-207ENST00000486572 FBXL13Q8NEE6 735 aa19.44■□□□□ 0.7
COL1A1-207ENST00000486572 FAM200AQ8TCP9 573 aa19.44■□□□□ 0.7
COL1A1-207ENST00000486572 GPT2Q8TD30 523 aa19.44■□□□□ 0.7
COL1A1-207ENST00000486572 SLC35C1Q96A29 364 aa19.44■□□□□ 0.7
COL1A1-207ENST00000486572 KCNK12Q9HB15 430 aa19.44■□□□□ 0.7
COL1A1-207ENST00000486572 NME7Q9Y5B8 376 aa19.44■□□□□ 0.7
COL1A1-207ENST00000486572 MYL4P12829 197 aa19.43■□□□□ 0.7
COL1A1-207ENST00000486572 CEBPBP17676 345 aa19.43■□□□□ 0.7
COL1A1-207ENST00000486572 CCR2P41597 374 aa19.43■□□□□ 0.7
COL1A1-207ENST00000486572 ASPAP45381 313 aa19.43■□□□□ 0.7
COL1A1-207ENST00000486572 CDH8P55286 799 aa19.43■□□□□ 0.7
COL1A1-207ENST00000486572 ZXDAP98168 799 aa19.43■□□□□ 0.7
COL1A1-207ENST00000486572 DNAJB7Q7Z6W7 309 aaPredicted RBP19.43■□□□□ 0.7
COL1A1-207ENST00000486572 TMC8Q8IU68 726 aa19.43■□□□□ 0.7
COL1A1-207ENST00000486572 MYCBPAPQ8TBZ2 947 aa19.43■□□□□ 0.7
COL1A1-207ENST00000486572 EDAQ92838 391 aa19.43■□□□□ 0.7
COL1A1-207ENST00000486572 NXPE3Q969Y0 559 aa19.43■□□□□ 0.7
COL1A1-207ENST00000486572 MYLPFQ96A32 169 aa19.43■□□□□ 0.7
COL1A1-207ENST00000486572 TCEAL4Q96EI5 215 aa19.43■□□□□ 0.7
COL1A1-207ENST00000486572 LPIN3Q9BQK8 851 aa19.43■□□□□ 0.7
COL1A1-207ENST00000486572 LRRC3Q9BY71 257 aa19.43■□□□□ 0.7
COL1A1-207ENST00000486572 SDCBP2Q9H190 292 aa19.43■□□□□ 0.7
COL1A1-207ENST00000486572 GDE1Q9NZC3 331 aa19.43■□□□□ 0.7
COL1A1-207ENST00000486572 RWDD2AQ9UIY3 292 aa19.43■□□□□ 0.7
COL1A1-207ENST00000486572 ANHXE9PGG2 379 aa19.42■□□□□ 0.7
COL1A1-207ENST00000486572 FGF19O95750 216 aa19.42■□□□□ 0.7
COL1A1-207ENST00000486572 GNA14O95837 355 aa19.42■□□□□ 0.7
COL1A1-207ENST00000486572 CYP2F1P24903 491 aa19.42■□□□□ 0.7
COL1A1-207ENST00000486572 RPL10AP62906 217 aaKnown RBP19.42■□□□□ 0.7
COL1A1-207ENST00000486572 HTR4Q13639 388 aa19.42■□□□□ 0.7
COL1A1-207ENST00000486572 CBWD6Q4V339 395 aa19.42■□□□□ 0.7
COL1A1-207ENST00000486572 MDH1BQ5I0G3 518 aa19.42■□□□□ 0.7
COL1A1-207ENST00000486572 CBWD3Q5JTY5 395 aa19.42■□□□□ 0.7
COL1A1-207ENST00000486572 CBWD5Q5RIA9 395 aa19.42■□□□□ 0.7
COL1A1-207ENST00000486572 UBALD2Q8IYN6 164 aa19.42■□□□□ 0.7
COL1A1-207ENST00000486572 B3GALNT2Q8NCR0 500 aa19.42■□□□□ 0.7
COL1A1-207ENST00000486572 PCED1BQ96HM7 432 aa19.42■□□□□ 0.7
COL1A1-207ENST00000486572 BCO2Q9BYV7 579 aa19.42■□□□□ 0.7
COL1A1-207ENST00000486572 NIF3L1Q9GZT8 377 aa19.42■□□□□ 0.7
COL1A1-207ENST00000486572 DPEP3Q9H4B8 488 aa19.42■□□□□ 0.7
COL1A1-207ENST00000486572 APOBEC3GQ9HC16 384 aaKnown RBP19.42■□□□□ 0.7
COL1A1-207ENST00000486572 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.42■□□□□ 0.7
COL1A1-207ENST00000486572 RAB20Q9NX57 234 aa19.42■□□□□ 0.7
COL1A1-207ENST00000486572 MAGEC2Q9UBF1 373 aaPredicted RBP19.42■□□□□ 0.7
COL1A1-207ENST00000486572 FGFR1OPO95684 399 aaKnown RBP19.41■□□□□ 0.7
COL1A1-207ENST00000486572 PTPN1P18031 435 aaKnown RBP19.41■□□□□ 0.7
COL1A1-207ENST00000486572 MAGEA11P43364 429 aa19.41■□□□□ 0.7
COL1A1-207ENST00000486572 CYP27A1Q02318 531 aa19.41■□□□□ 0.7
COL1A1-207ENST00000486572 TDGQ13569 410 aa19.41■□□□□ 0.7
COL1A1-207ENST00000486572 TAF12Q16514 161 aa19.41■□□□□ 0.7
COL1A1-207ENST00000486572 MTSS1LQ765P7 747 aa19.41■□□□□ 0.7
COL1A1-207ENST00000486572 GPR152Q8TDT2 470 aa19.41■□□□□ 0.7
COL1A1-207ENST00000486572 GIPC2Q8TF65 315 aa19.41■□□□□ 0.7
COL1A1-207ENST00000486572 RSAD2Q8WXG1 361 aa19.41■□□□□ 0.7
COL1A1-207ENST00000486572 SEMA4DQ92854 862 aa19.41■□□□□ 0.7
COL1A1-207ENST00000486572 MCRS1Q96EZ8 462 aa19.41■□□□□ 0.7
COL1A1-207ENST00000486572 TNIP3Q96KP6 325 aa19.41■□□□□ 0.7
COL1A1-207ENST00000486572 SRRTQ9BXP5 876 aaKnown RBP19.41■□□□□ 0.7
COL1A1-207ENST00000486572 ZNF334Q9HCZ1 680 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms