RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 PIK3R5Q8WYR1 880 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 GDAP1L1Q96MZ0 367 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 MCEEQ96PE7 176 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 TWNKQ96RR1 684 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 TRIM51Q9BSJ1 452 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 EIF2AQ9BY44 585 aaKnown RBP12.64□□□□□ -0.39
PKP4-213ENST00000486254 OSBPL8Q9BZF1 889 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 DCLK3Q9C098 648 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 SPC25Q9HBM1 224 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 CHST12Q9NRB3 414 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 SNTG2Q9NY99 539 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 GRHL1Q9NZI5 618 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 MTRF1LQ9UGC7 380 aaKnown RBP12.64□□□□□ -0.39
PKP4-213ENST00000486254 GTF2IRD1Q9UHL9 959 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 FAN1Q9Y2M0 1017 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 POLR3GO15318 223 aaPredicted RBP12.63□□□□□ -0.39
PKP4-213ENST00000486254 SEPT4O43236 478 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 ECM2O94769 699 aaPredicted RBP12.63□□□□□ -0.39
PKP4-213ENST00000486254 KRT3P12035 628 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 LRPAP1P30533 357 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 PCK1P35558 622 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 NDST1P52848 882 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 CDH8P55286 799 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 NFX1Q12986 1120 aaKnown RBP12.63□□□□□ -0.39
PKP4-213ENST00000486254 TRADDQ15628 312 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 TAZQ16635 292 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 UBXN11Q5T124 520 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 C9orf57Q5W0N0 161 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 LLGL2Q6P1M3 1020 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 DPH6Q7L8W6 267 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 ARCQ7LC44 396 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 RSPH3Q86UC2 560 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 VSIG1Q86XK7 387 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 ZDHHC17Q8IUH5 632 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 CCDC105Q8IYK2 499 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 ATL2Q8NHH9 583 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 TMEM40Q8WWA1 233 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 ZMAT2Q96NC0 199 aaKnown RBP12.63□□□□□ -0.39
PKP4-213ENST00000486254 ZIM3Q96PE6 472 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 CFHR5Q9BXR6 569 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 CDHR5Q9HBB8 845 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 VPS18Q9P253 973 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 HMGXB4Q9UGU5 601 aa12.63□□□□□ -0.39
PKP4-213ENST00000486254 PIN4Q9Y237 131 aaKnown RBP12.63□□□□□ -0.39
PKP4-213ENST00000486254 TCRBV7S2A1N4TA0A589 114 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 GOLGA6CA6NDK9 693 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 M0QYV0 167 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 M0QZ92 97 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 TJP3O95049 919 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 NUDT17P0C025 328 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 GOLGA6DP0CG33 693 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 RALAP11233 206 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 HSD17B3P37058 310 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 RPL34P49207 117 aaKnown RBP12.62□□□□□ -0.39
PKP4-213ENST00000486254 PSMC1P62191 440 aaKnown RBP12.62□□□□□ -0.39
PKP4-213ENST00000486254 MRPS6P82932 125 aaKnown RBP12.62□□□□□ -0.39
PKP4-213ENST00000486254 SLMAPQ14BN4 828 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 HADHQ16836 314 aaKnown RBP12.62□□□□□ -0.39
PKP4-213ENST00000486254 C2CD6Q53TS8 623 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 FBXO47Q5MNV8 452 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 ZDHHC24Q6UX98 284 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 CEP128Q6ZU80 1094 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 CRYBG2Q8N1P7 616 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 BBOF1Q8ND07 529 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 TRPV1Q8NER1 839 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 ART4Q93070 314 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 LENG1Q96BZ8 264 aaPredicted RBP12.62□□□□□ -0.39
PKP4-213ENST00000486254 SLITRK1Q96PX8 696 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 CPXM1Q96SM3 734 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 TRAIPQ9BWF2 469 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 FOXP3Q9BZS1 431 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 NEUROG2Q9H2A3 272 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 NXF3Q9H4D5 531 aaKnown RBP12.62□□□□□ -0.39
PKP4-213ENST00000486254 GOLGA6AQ9NYA3 693 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 CYTH4Q9UIA0 394 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 NEU2Q9Y3R4 380 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 TRPV2Q9Y5S1 764 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 SRCAPQ6ZRS2 3230 aa12.62□□□□□ -0.39
PKP4-213ENST00000486254 SMIM28A0A1B0GU29 152 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 HMGB1P1B2RPK0 211 aaPredicted RBP12.61□□□□□ -0.39
PKP4-213ENST00000486254 H0YGN5 161 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 DPYSL4O14531 572 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 ERBB2P04626 1255 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 ITIH2P19823 946 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 FGFR4P22455 802 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 CTGFP29279 349 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 RPL21P46778 160 aaKnown RBP12.61□□□□□ -0.39
PKP4-213ENST00000486254 GUCY2FP51841 1108 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 BEX3Q00994 111 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 OGDHQ02218 1023 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 SLC25A11Q02978 314 aaKnown RBP12.61□□□□□ -0.39
PKP4-213ENST00000486254 UAP1Q16222 522 aaPredicted RBP12.61□□□□□ -0.39
PKP4-213ENST00000486254 SV2CQ496J9 727 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 TFDP3Q5H9I0 405 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 ADAT2Q7Z6V5 191 aaKnown RBP12.61□□□□□ -0.39
PKP4-213ENST00000486254 SERINC5Q86VE9 423 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 DDX42Q86XP3 938 aaKnown RBP eCLIP12.61□□□□□ -0.39
PKP4-213ENST00000486254 HACE1Q8IYU2 909 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 CCDC89Q8N998 374 aa12.61□□□□□ -0.39
PKP4-213ENST00000486254 FAM76AQ8TAV0 307 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms