RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 CNTN3Q9P232 1028 aa18.99■□□□□ 0.63
MCF2L-226ENST00000486210 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.99■□□□□ 0.63
MCF2L-226ENST00000486210 SYCE3A1L190 88 aa18.98■□□□□ 0.63
MCF2L-226ENST00000486210 TRIM49BA6NDI0 452 aa18.98■□□□□ 0.63
MCF2L-226ENST00000486210 HEPACAM2A8MVW5 462 aa18.98■□□□□ 0.63
MCF2L-226ENST00000486210 ZNF263O14978 683 aa18.98■□□□□ 0.63
MCF2L-226ENST00000486210 KIF20AO95235 890 aa18.98■□□□□ 0.63
MCF2L-226ENST00000486210 SOX9P48436 509 aa18.98■□□□□ 0.63
MCF2L-226ENST00000486210 TEAD2Q15562 447 aa18.98■□□□□ 0.63
MCF2L-226ENST00000486210 ZSCAN23Q3MJ62 389 aa18.98■□□□□ 0.63
MCF2L-226ENST00000486210 CTXN3Q4LDR2 81 aa18.98■□□□□ 0.63
MCF2L-226ENST00000486210 ZCWPW2Q504Y3 356 aa18.98■□□□□ 0.63
MCF2L-226ENST00000486210 ARMCX5Q6P1M9 558 aa18.98■□□□□ 0.63
MCF2L-226ENST00000486210 SASS6Q6UVJ0 657 aa18.98■□□□□ 0.63
MCF2L-226ENST00000486210 Q6ZS52 159 aa18.98■□□□□ 0.63
MCF2L-226ENST00000486210 SPEM1Q8N4L4 309 aa18.98■□□□□ 0.63
MCF2L-226ENST00000486210 POMGNT1Q8WZA1 660 aa18.98■□□□□ 0.63
MCF2L-226ENST00000486210 MSTO1Q9BUK6 570 aa18.98■□□□□ 0.63
MCF2L-226ENST00000486210 AFF4Q9UHB7 1163 aaKnown RBP18.98■□□□□ 0.63
MCF2L-226ENST00000486210 CTNND2Q9UQB3 1225 aa18.98■□□□□ 0.63
MCF2L-226ENST00000486210 KIF26AQ9ULI4 1882 aaPredicted RBP18.98■□□□□ 0.63
MCF2L-226ENST00000486210 USP24Q9UPU5 2620 aa18.98■□□□□ 0.63
MCF2L-226ENST00000486210 NUP210Q8TEM1 1887 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-226ENST00000486210 PDXKO00764 312 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 FAM189A1O60320 539 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 PAPSS2O95340 614 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-226ENST00000486210 MYL4P12829 197 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 GARTP22102 1010 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 TNFSF9P41273 254 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 STX17P56962 302 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 ANKRD40Q6AI12 368 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 SLFN12LQ6IEE8 588 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 IQCEQ6IPM2 695 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 CENPPQ6IPU0 288 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 RNF19BQ6ZMZ0 732 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 ELMOD1Q8N336 334 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 MLKLQ8NB16 471 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 APPL2Q8NEU8 664 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 SHKBP1Q8TBC3 707 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 NELFBQ8WX92 580 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 C18orf25Q96B23 403 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-226ENST00000486210 SAAL1Q96ER3 474 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 DHTKD1Q96HY7 919 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-226ENST00000486210 SUSD3Q96L08 255 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 ZNF512Q96ME7 567 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-226ENST00000486210 MED15Q96RN5 788 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 FUCA2Q9BTY2 467 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 LRRC3Q9BY71 257 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 AGO2Q9UKV8 859 aaKnown RBP18.97■□□□□ 0.63
MCF2L-226ENST00000486210 TRAF3IP3Q9Y228 551 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 CFAP47Q6ZTR5 3102 aa18.97■□□□□ 0.63
MCF2L-226ENST00000486210 CHD8Q9HCK8 2581 aa18.96■□□□□ 0.63
MCF2L-226ENST00000486210 GOLGA8IPA6NC78 632 aa18.96■□□□□ 0.63
MCF2L-226ENST00000486210 GOLGA8JA6NMD2 632 aa18.96■□□□□ 0.63
MCF2L-226ENST00000486210 VNN2O95498 520 aa18.96■□□□□ 0.63
MCF2L-226ENST00000486210 MLLT6P55198 1093 aaPredicted RBP18.96■□□□□ 0.63
MCF2L-226ENST00000486210 TYRO3Q06418 890 aa18.96■□□□□ 0.63
MCF2L-226ENST00000486210 STIM1Q13586 685 aa18.96■□□□□ 0.63
MCF2L-226ENST00000486210 ZNF280DQ6N043 979 aa18.96■□□□□ 0.63
MCF2L-226ENST00000486210 TXNDC11Q6PKC3 985 aa18.96■□□□□ 0.63
MCF2L-226ENST00000486210 HS2ST1Q7LGA3 356 aa18.96■□□□□ 0.63
MCF2L-226ENST00000486210 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.96■□□□□ 0.63
MCF2L-226ENST00000486210 LONP2Q86WA8 852 aa18.96■□□□□ 0.63
MCF2L-226ENST00000486210 TMEM130Q8N3G9 435 aa18.96■□□□□ 0.63
MCF2L-226ENST00000486210 ASAH2Q9NR71 780 aa18.96■□□□□ 0.63
MCF2L-226ENST00000486210 HSPBP1Q9NZL4 362 aa18.96■□□□□ 0.63
MCF2L-226ENST00000486210 SLC38A8A6NNN8 435 aa18.95■□□□□ 0.62
MCF2L-226ENST00000486210 PSMA7O14818 248 aa18.95■□□□□ 0.62
MCF2L-226ENST00000486210 OGTO15294 1046 aa18.95■□□□□ 0.62
MCF2L-226ENST00000486210 XPOTO43592 962 aaKnown RBP18.95■□□□□ 0.62
MCF2L-226ENST00000486210 CALUO43852 315 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-226ENST00000486210 LETM1O95202 739 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-226ENST00000486210 CNR2P34972 360 aa18.95■□□□□ 0.62
MCF2L-226ENST00000486210 PPP1R2P41236 205 aa18.95■□□□□ 0.62
MCF2L-226ENST00000486210 ACOT2P49753 483 aa18.95■□□□□ 0.62
MCF2L-226ENST00000486210 CYP2J2P51589 502 aa18.95■□□□□ 0.62
MCF2L-226ENST00000486210 SNRPFP62306 86 aaKnown RBP18.95■□□□□ 0.62
MCF2L-226ENST00000486210 FCHO2Q0JRZ9 810 aa18.95■□□□□ 0.62
MCF2L-226ENST00000486210 KYAT1Q16773 422 aa18.95■□□□□ 0.62
MCF2L-226ENST00000486210 HEATR6Q6AI08 1181 aaKnown RBP18.95■□□□□ 0.62
MCF2L-226ENST00000486210 CRELD2Q6UXH1 353 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-226ENST00000486210 C11orf57Q6ZUT1 292 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-226ENST00000486210 TMC8Q8IU68 726 aa18.95■□□□□ 0.62
MCF2L-226ENST00000486210 C12orf56Q8IXR9 622 aa18.95■□□□□ 0.62
MCF2L-226ENST00000486210 FAM160A2Q8N612 972 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-226ENST00000486210 LEMD2Q8NC56 503 aa18.95■□□□□ 0.62
MCF2L-226ENST00000486210 DUSP9Q99956 384 aaKnown RBP18.95■□□□□ 0.62
MCF2L-226ENST00000486210 GZF1Q9H116 711 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-226ENST00000486210 DMAC2Q9NW81 257 aa18.95■□□□□ 0.62
MCF2L-226ENST00000486210 YIPF1Q9Y548 306 aa18.95■□□□□ 0.62
MCF2L-226ENST00000486210 CHADO15335 359 aa18.94■□□□□ 0.62
MCF2L-226ENST00000486210 NR3C1P04150 777 aa18.94■□□□□ 0.62
MCF2L-226ENST00000486210 CLTAP09496 248 aa18.94■□□□□ 0.62
MCF2L-226ENST00000486210 PPP2R3AQ06190 1150 aa18.94■□□□□ 0.62
MCF2L-226ENST00000486210 PAK1Q13153 545 aa18.94■□□□□ 0.62
MCF2L-226ENST00000486210 STX1AQ16623 288 aa18.94■□□□□ 0.62
MCF2L-226ENST00000486210 STXBP5Q5T5C0 1151 aa18.94■□□□□ 0.62
MCF2L-226ENST00000486210 TTI2Q6NXR4 508 aa18.94■□□□□ 0.62
MCF2L-226ENST00000486210 GPIHBP1Q8IV16 184 aa18.94■□□□□ 0.62
MCF2L-226ENST00000486210 BEST2Q8NFU1 509 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms