RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 ERBB2P04626 1255 aa4.99□□□□□ -1.61
VPS41-213ENST00000485955 WT1P19544 449 aaPredicted RBP4.99□□□□□ -1.61
VPS41-213ENST00000485955 PROK1P58294 105 aa4.99□□□□□ -1.61
VPS41-213ENST00000485955 RAB1AP62820 205 aa4.99□□□□□ -1.61
VPS41-213ENST00000485955 TBCCQ15814 346 aa4.99□□□□□ -1.61
VPS41-213ENST00000485955 GRASPQ7Z6J2 395 aaPredicted RBP4.99□□□□□ -1.61
VPS41-213ENST00000485955 AMIGO2Q86SJ2 522 aa4.99□□□□□ -1.61
VPS41-213ENST00000485955 RASAL3Q86YV0 1011 aa4.99□□□□□ -1.61
VPS41-213ENST00000485955 CAMKK1Q8N5S9 505 aa4.99□□□□□ -1.61
VPS41-213ENST00000485955 NELL1Q92832 810 aa4.99□□□□□ -1.61
VPS41-213ENST00000485955 PBKQ96KB5 322 aa4.99□□□□□ -1.61
VPS41-213ENST00000485955 MRGPRX1Q96LB2 322 aa4.99□□□□□ -1.61
VPS41-213ENST00000485955 AIFM3Q96NN9 605 aa4.99□□□□□ -1.61
VPS41-213ENST00000485955 TAAR9Q96RI9 348 aa4.99□□□□□ -1.61
VPS41-213ENST00000485955 HAPLN3Q96S86 360 aa4.99□□□□□ -1.61
VPS41-213ENST00000485955 SARS2Q9NP81 518 aaKnown RBP4.99□□□□□ -1.61
VPS41-213ENST00000485955 ADARB2Q9NS39 739 aaKnown RBP4.99□□□□□ -1.61
VPS41-213ENST00000485955 SHROOM4Q9ULL8 1493 aa4.99□□□□□ -1.61
VPS41-213ENST00000485955 H3BML4 177 aa4.98□□□□□ -1.61
VPS41-213ENST00000485955 PROP1O75360 226 aa4.98□□□□□ -1.61
VPS41-213ENST00000485955 RFPL1O75677 317 aa4.98□□□□□ -1.61
VPS41-213ENST00000485955 C1RP00736 705 aa4.98□□□□□ -1.61
VPS41-213ENST00000485955 JUPP14923 745 aa4.98□□□□□ -1.61
VPS41-213ENST00000485955 ZFXP17010 805 aaPredicted RBP4.98□□□□□ -1.61
VPS41-213ENST00000485955 HTR1BP28222 390 aa4.98□□□□□ -1.61
VPS41-213ENST00000485955 PCSK6P29122 969 aa4.98□□□□□ -1.61
VPS41-213ENST00000485955 KCNJ5P48544 419 aa4.98□□□□□ -1.61
VPS41-213ENST00000485955 EPHB1P54762 984 aa4.98□□□□□ -1.61
VPS41-213ENST00000485955 LILRA4P59901 499 aa4.98□□□□□ -1.61
VPS41-213ENST00000485955 KRTAP1-1Q07627 177 aa4.98□□□□□ -1.61
VPS41-213ENST00000485955 EIF2B5Q13144 721 aaKnown RBP4.98□□□□□ -1.61
VPS41-213ENST00000485955 LONRF3Q496Y0 759 aa4.98□□□□□ -1.61
VPS41-213ENST00000485955 DENND1CQ8IV53 801 aa4.98□□□□□ -1.61
VPS41-213ENST00000485955 P2RX7Q99572 595 aaKnown RBP4.98□□□□□ -1.61
VPS41-213ENST00000485955 ALG8Q9BVK2 526 aa4.98□□□□□ -1.61
VPS41-213ENST00000485955 SSX2IPQ9Y2D8 614 aa4.98□□□□□ -1.61
VPS41-213ENST00000485955 PRPF3O43395 683 aaKnown RBP4.97□□□□□ -1.61
VPS41-213ENST00000485955 ORC4O43929 436 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 URI1O94763 535 aaPredicted RBP4.97□□□□□ -1.61
VPS41-213ENST00000485955 GRPP07492 148 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 HSPA6P17066 643 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 GPD1P21695 349 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 GTF2H3Q13889 308 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 FGL2Q14314 439 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 LRRC41Q15345 812 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 ZNF788Q6ZQV5 615 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 MAVSQ7Z434 540 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 DTX2Q86UW9 622 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 ZBTB34Q8NCN2 500 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 SARAFQ96BY9 339 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 MTFMTQ96DP5 389 aaKnown RBP4.97□□□□□ -1.61
VPS41-213ENST00000485955 CAMKK2Q96RR4 588 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 NELL2Q99435 816 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 NMRK2Q9NPI5 230 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 SERTAD4Q9NUC0 356 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 EHD3Q9NZN3 535 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 SERTAD3Q9UJW9 196 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 FRMD4BQ9Y2L6 1034 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 MED16Q9Y2X0 877 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 PLEKHM1Q9Y4G2 1056 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 TNFRSF18Q9Y5U5 241 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 AOX1Q06278 1338 aa4.97□□□□□ -1.61
VPS41-213ENST00000485955 FER1L4A9Z1Z3 1794 aa4.96□□□□□ -1.61
VPS41-213ENST00000485955 TTLL1O95922 423 aa4.96□□□□□ -1.62
VPS41-213ENST00000485955 NPR1P16066 1061 aa4.96□□□□□ -1.62
VPS41-213ENST00000485955 PXNP49023 591 aaPredicted RBP4.96□□□□□ -1.62
VPS41-213ENST00000485955 UCP3P55916 312 aa4.96□□□□□ -1.62
VPS41-213ENST00000485955 IQCB1Q15051 598 aa4.96□□□□□ -1.62
VPS41-213ENST00000485955 AMOTQ4VCS5 1084 aa4.96□□□□□ -1.62
VPS41-213ENST00000485955 ICE2Q659A1 982 aa4.96□□□□□ -1.62
VPS41-213ENST00000485955 ZNF280BQ86YH2 543 aa4.96□□□□□ -1.62
VPS41-213ENST00000485955 PTDSS2Q9BVG9 487 aa4.96□□□□□ -1.62
VPS41-213ENST00000485955 ZMAT3Q9HA38 289 aaKnown RBP4.96□□□□□ -1.62
VPS41-213ENST00000485955 XPR1Q9UBH6 696 aa4.96□□□□□ -1.62
VPS41-213ENST00000485955 NOB1Q9ULX3 412 aaKnown RBP4.96□□□□□ -1.62
VPS41-213ENST00000485955 WIPF3A6NGB9 483 aa4.95□□□□□ -1.62
VPS41-213ENST00000485955 hCG_1984214I3L0E3 225 aa4.95□□□□□ -1.62
VPS41-213ENST00000485955 ATXN1LP0C7T5 689 aaKnown RBP4.95□□□□□ -1.62
VPS41-213ENST00000485955 EBLN1P0CF75 366 aa4.95□□□□□ -1.62
VPS41-213ENST00000485955 LIPAP38571 399 aa4.95□□□□□ -1.62
VPS41-213ENST00000485955 SLC11A2P49281 568 aa4.95□□□□□ -1.62
VPS41-213ENST00000485955 CCT8P50990 548 aa4.95□□□□□ -1.62
VPS41-213ENST00000485955 AGFG1P52594 562 aaKnown RBP4.95□□□□□ -1.62
VPS41-213ENST00000485955 ARFIP2P53365 341 aa4.95□□□□□ -1.62
VPS41-213ENST00000485955 BMPR2Q13873 1038 aa4.95□□□□□ -1.62
VPS41-213ENST00000485955 PLEKHG6Q3KR16 790 aa4.95□□□□□ -1.62
VPS41-213ENST00000485955 ODR4Q5SWX8 454 aa4.95□□□□□ -1.62
VPS41-213ENST00000485955 ARHGAP40Q5TG30 622 aa4.95□□□□□ -1.62
VPS41-213ENST00000485955 LAYNQ6UX15 382 aa4.95□□□□□ -1.62
VPS41-213ENST00000485955 OVCH2Q7RTZ1 564 aa4.95□□□□□ -1.62
VPS41-213ENST00000485955 DAAM2Q86T65 1068 aa4.95□□□□□ -1.62
VPS41-213ENST00000485955 DPF1Q92782 380 aa4.95□□□□□ -1.62
VPS41-213ENST00000485955 ATP6V0A4Q9HBG4 840 aa4.95□□□□□ -1.62
VPS41-213ENST00000485955 ARHGEF3Q9NR81 526 aa4.95□□□□□ -1.62
VPS41-213ENST00000485955 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.95□□□□□ -1.62
VPS41-213ENST00000485955 MRPS17Q9Y2R5 130 aaKnown RBP4.95□□□□□ -1.62
VPS41-213ENST00000485955 MANSC4A6NHS7 340 aaPredicted RBP4.94□□□□□ -1.62
VPS41-213ENST00000485955 CGB1A6NKQ9 187 aa4.94□□□□□ -1.62
VPS41-213ENST00000485955 GCOM1H8Y6P7 765 aaPredicted RBP4.94□□□□□ -1.62
VPS41-213ENST00000485955 CTNND1O60716 968 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms