RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 DPEP3Q9H4B8 488 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 NAGPAQ9UK23 515 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 ADAM28Q9UKQ2 775 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 PCDHB8Q9UN66 801 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 PCDHGC3Q9UN70 934 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 FAN1Q9Y2M0 1017 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 MRPL42Q9Y6G3 142 aaKnown RBP12.04□□□□□ -0.48
SND1-212ENST00000485871 RCCD1A6NED2 376 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 ZBBXA8MT70 800 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 THAP12O43422 761 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 AKR1B10O60218 316 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 KIF5CO60282 957 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 VDRP11473 427 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 ODC1P11926 461 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 TNFAIP3P21580 790 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 CASQ1P31415 396 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 GNL1P36915 607 aaPredicted RBP12.03□□□□□ -0.48
SND1-212ENST00000485871 TUBB4BP68371 445 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 CYP27A1Q02318 531 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 MRPL58Q14197 206 aaKnown RBP12.03□□□□□ -0.48
SND1-212ENST00000485871 PKDCCQ504Y2 493 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 ARHGAP17Q68EM7 881 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 FUT10Q6P4F1 479 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 SYT10Q6XYQ8 523 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 ACOT1Q86TX2 421 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 HERC6Q8IVU3 1022 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 SLC39A11Q8N1S5 342 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 PKMYT1Q99640 499 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 LPIN3Q9BQK8 851 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 COLEC11Q9BWP8 271 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 ISCUQ9H1K1 167 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 TAS2R14Q9NYV8 317 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 DNAI1Q9UI46 699 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.03□□□□□ -0.48
SND1-212ENST00000485871 TIMM13Q9Y5L4 95 aaPredicted RBP12.03□□□□□ -0.48
SND1-212ENST00000485871 SPTBN5Q9NRC6 3674 aaKnown RBP12.03□□□□□ -0.48
SND1-212ENST00000485871 ATG2AQ2TAZ0 1938 aa12.03□□□□□ -0.48
SND1-212ENST00000485871 EYSQ5T1H1 3165 aa12.02□□□□□ -0.48
SND1-212ENST00000485871 PRUNE2Q8WUY3 3088 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 A8MXQ7 604 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 NT5C1B-RDH14C9J2C7 533 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 SYN3O14994 580 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 PJA2O43164 708 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 OAZ2O95190 189 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 GZMAP12544 262 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 FGFR3P22607 806 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 TKTP29401 623 aaKnown RBP12.02□□□□□ -0.49
SND1-212ENST00000485871 ARHGAP25P42331 645 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 LHX1P48742 406 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 VAV2P52735 878 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 NOMO3P69849 1222 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 SMAD3P84022 425 aaKnown RBP12.02□□□□□ -0.49
SND1-212ENST00000485871 BTG3Q14201 252 aaPredicted RBP12.02□□□□□ -0.49
SND1-212ENST00000485871 CNGA2Q16280 664 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 CCDC142Q17RM4 750 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 CLEC16AQ2KHT3 1053 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 ARHGAP29Q52LW3 1261 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 C9orf50Q5SZB4 431 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 ALKBH5Q6P6C2 394 aaKnown RBP12.02□□□□□ -0.49
SND1-212ENST00000485871 KCNT2Q6UVM3 1135 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 WDTC1Q8N5D0 677 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 C12orf29Q8N999 325 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 COLGALT1Q8NBJ5 622 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 IGSF21Q96ID5 467 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 YME1L1Q96TA2 773 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 LHX5Q9H2C1 402 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 TTYH1Q9H313 450 aaPredicted RBP12.02□□□□□ -0.49
SND1-212ENST00000485871 SNX25Q9H3E2 840 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 DEF6Q9H4E7 631 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 CRTAC1Q9NQ79 661 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 DDX43Q9NXZ2 648 aaKnown RBP12.02□□□□□ -0.49
SND1-212ENST00000485871 DSEQ9UL01 958 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 KIAA1257Q9ULG3 409 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 TFR2Q9UP52 801 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 SLC4A7Q9Y6M7 1214 aa12.02□□□□□ -0.49
SND1-212ENST00000485871 LAMA2P24043 3122 aaKnown RBP12.02□□□□□ -0.49
SND1-212ENST00000485871 ARHGEF37A1IGU5 675 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 TRAPPC3O43617 180 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 RRP9O43818 475 aaKnown RBP12.01□□□□□ -0.49
SND1-212ENST00000485871 TBC1D4O60343 1298 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 ATP2C2O75185 946 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 TADA2AO75478 443 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 MICAL2O94851 1124 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 ABL1P00519 1130 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 PDGFRBP09619 1106 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 CD19P15391 556 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 ATP2A2P16615 1042 aaKnown RBP12.01□□□□□ -0.49
SND1-212ENST00000485871 PTPN1P18031 435 aaKnown RBP12.01□□□□□ -0.49
SND1-212ENST00000485871 LAG3P18627 525 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 ACAT1P24752 427 aaKnown RBP12.01□□□□□ -0.49
SND1-212ENST00000485871 GNG11P61952 73 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 CENPCQ03188 943 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 PTP4A2Q12974 167 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 SGO2Q562F6 1265 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 PPP1R26Q5T8A7 1209 aaPredicted RBP12.01□□□□□ -0.49
SND1-212ENST00000485871 DENND1BQ6P3S1 775 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 FAM171BQ6P995 826 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 LCLAT1Q6UWP7 414 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 TRIM72Q6ZMU5 477 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 PAQR9Q6ZVX9 377 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms