RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 LPPQ93052 612 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 PHKBQ93100 1093 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 ZNF668Q96K58 619 aaPredicted RBP7.43□□□□□ -1.22
SMC4-217ENST00000485867 RPS6KC1Q96S38 1066 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 NELL2Q99435 816 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 HERC2P3Q9BVR0 1158 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 KRT23Q9C075 422 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 NT5C3AQ9H0P0 336 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 KCNH7Q9NS40 1196 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 ZDHHC7Q9NXF8 308 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 DACT1Q9NYF0 836 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 DPP7Q9UHL4 492 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 CDH7Q9ULB5 785 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 INPP5FQ9Y2H2 1132 aa7.43□□□□□ -1.22
SMC4-217ENST00000485867 TMEM8BA6NDV4 472 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 SHISA7A6NL88 538 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 TAF4O00268 1085 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 OFD1O75665 1012 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 KCNK5O95279 499 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 SOD2P04179 222 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 GLI1P08151 1106 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 SPATA31D3P0C874 917 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 NCLP19338 710 aaKnown RBP7.42□□□□□ -1.22
SMC4-217ENST00000485867 GDNFP39905 211 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 LIG3P49916 1009 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 ADCY1Q08828 1119 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 SIM2Q14190 667 aaPredicted RBP7.42□□□□□ -1.22
SMC4-217ENST00000485867 UBE2SQ16763 222 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 LONRF3Q496Y0 759 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 AASDHQ4L235 1098 aaPredicted RBP7.42□□□□□ -1.22
SMC4-217ENST00000485867 ABHD15Q6UXT9 468 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 SPOCD1Q6ZMY3 1216 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 SPATA31D4Q6ZUB0 917 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 MTSS1LQ765P7 747 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 CYB5R4Q7L1T6 521 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.42□□□□□ -1.22
SMC4-217ENST00000485867 TICAM2Q86XR7 235 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 CILP2Q8IUL8 1156 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 MRPL41Q8IXM3 137 aaKnown RBP7.42□□□□□ -1.22
SMC4-217ENST00000485867 KIRREL1Q96J84 757 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 COX4I2Q96KJ9 171 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 MAP7D2Q96T17 732 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 MXRA8Q9BRK3 442 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 TRAIPQ9BWF2 469 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 PLEKHA4Q9H4M7 779 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 CNNM2Q9H8M5 875 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 RXFP1Q9HBX9 757 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 ZNF302Q9NR11 478 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 AKT3Q9Y243 479 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 AKAP13Q12802 2813 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 EML5Q05BV3 1969 aa7.42□□□□□ -1.22
SMC4-217ENST00000485867 ACACAQ13085 2346 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 PCNX2A6NKB5 2137 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 DDX39AO00148 427 aaKnown RBP7.41□□□□□ -1.22
SMC4-217ENST00000485867 MAGEB2O15479 319 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 DDHD2O94830 711 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 CBX7O95931 251 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 EFEMP2O95967 443 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 C1RP00736 705 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 KIR3DL1P43629 444 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 GLUD2P49448 558 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 GPC3P51654 580 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 MFAP1P55081 439 aaKnown RBP7.41□□□□□ -1.22
SMC4-217ENST00000485867 NTHL1P78549 312 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 TNK2Q07912 1038 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 TROAPQ12815 778 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 SRSF5Q13243 272 aaKnown RBP7.41□□□□□ -1.22
SMC4-217ENST00000485867 SF3A2Q15428 464 aaKnown RBP7.41□□□□□ -1.22
SMC4-217ENST00000485867 ZNF852Q6ZMS4 543 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 TAS1R1Q7RTX1 841 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 CKAP2LQ8IYA6 745 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 RNF168Q8IYW5 571 aaPredicted RBP7.41□□□□□ -1.22
SMC4-217ENST00000485867 LRRC71Q8N4P6 559 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 FGF13Q92913 245 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 DUSP9Q99956 384 aaKnown RBP7.41□□□□□ -1.22
SMC4-217ENST00000485867 KXD1Q9BQD3 176 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 TMEM175Q9BSA9 504 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 IER2Q9BTL4 223 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 PHF20Q9BVI0 1012 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 SPZ1Q9BXG8 430 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 PSTPIP2Q9H939 334 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 AGO4Q9HCK5 861 aaKnown RBP7.41□□□□□ -1.22
SMC4-217ENST00000485867 RXFP3Q9NSD7 469 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 MARCH5Q9NX47 278 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 TJP2Q9UDY2 1190 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 PCDHA6Q9UN73 950 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 WASF3Q9UPY6 502 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 SSX2IPQ9Y2D8 614 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 FAN1Q9Y2M0 1017 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 MRPS17Q9Y2R5 130 aaKnown RBP7.41□□□□□ -1.22
SMC4-217ENST00000485867 PCDHA8Q9Y5H6 950 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 ASCC3Q8N3C0 2202 aaKnown RBP7.41□□□□□ -1.22
SMC4-217ENST00000485867 CACNA1EQ15878 2313 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 IGSF10Q6WRI0 2623 aa7.41□□□□□ -1.22
SMC4-217ENST00000485867 SMG1Q96Q15 3661 aaKnown RBP7.41□□□□□ -1.22
SMC4-217ENST00000485867 DMXL2Q8TDJ6 3036 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 CHURC1-FNTBB4DL54 471 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 CCER2I3L3R5 266 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 NRP1O14786 923 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 TGM5O43548 720 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms