RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 PPP1R14CQ8TAE6 165 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 GTF3C6Q969F1 213 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 LTV1Q96GA3 475 aaPredicted RBP4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 SDF4Q9BRK5 362 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 CRB3Q9BUF7 120 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 TARS2Q9BW92 718 aaKnown RBP4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 SSBP3Q9BWW4 388 aaPredicted RBP4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 TEX13AQ9BXU3 409 aaPredicted RBP4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 RNF38Q9H0F5 515 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 NUP62CLQ9H1M0 184 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 CLSTN2Q9H4D0 955 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 SLC52A2Q9HAB3 445 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 AGO4Q9HCK5 861 aaKnown RBP4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 ZNF304Q9HCX3 659 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 KCND1Q9NSA2 647 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 SMPD4Q9NXE4 827 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 NSMCE4AQ9NXX6 385 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 LRP2BPQ9P2M1 347 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 SH3BGRL2Q9UJC5 107 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 C2CD2Q9Y426 696 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 KIF3AQ9Y496 699 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 FPGT-TNNI3KV9GXZ4 949 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 KDM6AO15550 1401 aaPredicted RBP4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 DCCP43146 1447 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 TNKSO95271 1327 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 SCN11AQ9UI33 1791 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 ALS2Q96Q42 1657 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 GLI3P10071 1580 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 SPEF2Q9C093 1822 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 PARP4Q9UKK3 1724 aaKnown RBP4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 RRN3P2A6NIE6 340 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 MASP2O00187 686 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 P4HA2O15460 535 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 AP5Z1O43299 807 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 PFKFB2O60825 505 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 MT-ND3P03897 115 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 DNTTP04053 509 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 ANXA1P04083 346 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 SLC3A2P08195 630 aaKnown RBP4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 SNRPA1P09661 255 aaKnown RBP4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 MYCLP12524 364 aaPredicted RBP4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 FPR2P25090 351 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 GNL1P36915 607 aaPredicted RBP4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 USP8P40818 1118 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 ALDH5A1P51649 535 aaPredicted RBP4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 ZBTB16Q05516 673 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 PRPF4BQ13523 1007 aaKnown RBP4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 STAT4Q14765 748 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 RASA2Q15283 850 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 TAF12Q16514 161 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 ASIC2Q16515 512 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 C5orf22Q49AR2 442 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 CCDC152Q4G0S7 254 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 LRCH2Q5VUJ6 765 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 TLDC1Q6P9B6 456 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 POMZP3Q6PJE2 187 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 CCDC149Q6ZUS6 474 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 ENOSF1Q7L5Y1 443 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 RALYLQ86SE5 291 aaKnown RBP4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 CABP7Q86V35 215 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 ZNF761Q86XN6 746 aaPredicted RBP4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 EPHX4Q8IUS5 362 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 CCDC103Q8IW40 242 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 NRSN1Q8IZ57 195 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 PPM1KQ8N3J5 372 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 MYCT1Q8N699 235 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 CNTD1Q8N815 330 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 KBTBD3Q8NAB2 608 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 DRAXINQ8NBI3 349 aaPredicted RBP4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 SLC16A11Q8NCK7 471 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 ST13P5Q8NFI4 369 aaPredicted RBP4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 PLEKHO2Q8TD55 490 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 ZNF606Q8WXB4 792 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 LRRC59Q96AG4 307 aaKnown RBP4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 ZNF669Q96BR6 464 aaPredicted RBP4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 RBM18Q96H35 190 aaKnown RBP4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 NAF1Q96HR8 494 aaKnown RBP4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 FAM227BQ96M60 508 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 CCDC114Q96M63 670 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 LRGUKQ96M69 825 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 CCDC138Q96M89 665 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 TSGA13Q96PP4 275 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 C7orf25Q9BPX7 421 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 FSD1Q9BTV5 496 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 NKX2-4Q9H2Z4 354 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 ARFGAP3Q9NP61 516 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 TRPV5Q9NQA5 729 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 CYP26B1Q9NR63 512 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 QPCTLQ9NXS2 382 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 CALCOCO1Q9P1Z2 691 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 ZNF112Q9UJU3 913 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 DBNLQ9UJU6 430 aaKnown RBP4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 RCOR1Q9UKL0 485 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 GJD2Q9UKL4 321 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 ZBTB21Q9ULJ3 1066 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 GPR52Q9Y2T5 361 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 GIT1Q9Y2X7 761 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 TMEM98Q9Y2Y6 226 aa4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 EPN1Q9Y6I3 576 aaPredicted RBP4.36□□□□□ -1.71
PRPF38B-205ENST00000485810 COL18A1P39060 1754 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms