RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 VDRP11473 427 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 CYP11B1P15538 503 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 CHRNB2P17787 502 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 ACAT1P24752 427 aaKnown RBP16.85■□□□□ 0.29
APOE-205ENST00000485628 BPIFB4P59827 614 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 GPM6BQ13491 265 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 RAB33AQ14088 237 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 CNGA2Q16280 664 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 PSMD5Q16401 504 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 ASTE1Q2TB18 679 aaPredicted RBP16.85■□□□□ 0.29
APOE-205ENST00000485628 CTXN3Q4LDR2 81 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 ZNF394Q53GI3 561 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 PDE12Q6L8Q7 609 aaKnown RBP16.85■□□□□ 0.29
APOE-205ENST00000485628 ZNF280DQ6N043 979 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 ACOT1Q86TX2 421 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 C12orf29Q8N999 325 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 HNRNPABQ99729 332 aaKnown RBP16.85■□□□□ 0.29
APOE-205ENST00000485628 SYT15Q9BQS2 421 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 TLR9Q9NR96 1032 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.85■□□□□ 0.291e-7■■■□□ 14.9
APOE-205ENST00000485628 MRPL17Q9NRX2 175 aaKnown RBP16.85■□□□□ 0.29
APOE-205ENST00000485628 TMLHEQ9NVH6 421 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 ARHGAP20Q9P2F6 1191 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 PCDHGC3Q9UN70 934 aa16.85■□□□□ 0.29
APOE-205ENST00000485628 COL4A4P53420 1690 aaPredicted RBP16.85■□□□□ 0.29
APOE-205ENST00000485628 O00370 1275 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 SOX1O00570 391 aaPredicted RBP16.84■□□□□ 0.29
APOE-205ENST00000485628 CALCAP01258 141 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 URODP06132 367 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 KRT5P13647 590 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 IRS1P35568 1242 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 GSDMDP57764 484 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 PTK2Q05397 1052 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 GPR17Q13304 367 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 MAPK8IP2Q13387 824 aaPredicted RBP16.84■□□□□ 0.29
APOE-205ENST00000485628 ORC1Q13415 861 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 CCDC142Q17RM4 750 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 LILRA6Q6PI73 481 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 LCLAT1Q6UWP7 414 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 NOP9Q86U38 636 aaKnown RBP16.84■□□□□ 0.29
APOE-205ENST00000485628 ZNF677Q86XU0 584 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 FUKQ8N0W3 1084 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 SLC30A5Q8TAD4 765 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 AUTS2Q8WXX7 1259 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 TTYH1Q9H313 450 aaPredicted RBP16.84■□□□□ 0.29
APOE-205ENST00000485628 ZNF576Q9H609 170 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 NGRNQ9NPE2 291 aaKnown RBP16.84■□□□□ 0.29
APOE-205ENST00000485628 MTUS1Q9ULD2 1270 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 NENFQ9UMX5 172 aa16.84■□□□□ 0.29
APOE-205ENST00000485628 CXCL14O95715 111 aa16.83■□□□□ 0.28
APOE-205ENST00000485628 SERPING1P05155 500 aa16.83■□□□□ 0.28
APOE-205ENST00000485628 TPM1P09493 284 aa16.83■□□□□ 0.28
APOE-205ENST00000485628 CNPP09543 421 aaKnown RBP16.83■□□□□ 0.28
APOE-205ENST00000485628 POU3F3P20264 500 aaPredicted RBP16.83■□□□□ 0.28
APOE-205ENST00000485628 CDH5P33151 784 aaPredicted RBP16.83■□□□□ 0.28
APOE-205ENST00000485628 FMO1Q01740 532 aa16.83■□□□□ 0.28
APOE-205ENST00000485628 SMARCB1Q12824 385 aa16.83■□□□□ 0.28
APOE-205ENST00000485628 CFAP221Q4G0U5 840 aa16.83■□□□□ 0.28
APOE-205ENST00000485628 PPP1R26Q5T8A7 1209 aaPredicted RBP16.83■□□□□ 0.28
APOE-205ENST00000485628 CCDC186Q7Z3E2 898 aa16.83■□□□□ 0.28
APOE-205ENST00000485628 ZNF571Q7Z3V5 609 aaPredicted RBP16.83■□□□□ 0.28
APOE-205ENST00000485628 PCED1BQ96HM7 432 aa16.83■□□□□ 0.28
APOE-205ENST00000485628 HEXIM2Q96MH2 286 aaKnown RBP16.83■□□□□ 0.28
APOE-205ENST00000485628 KLHL5Q96PQ7 755 aa16.83■□□□□ 0.28
APOE-205ENST00000485628 TCF25Q9BQ70 676 aa16.83■□□□□ 0.28
APOE-205ENST00000485628 B3GNT5Q9BYG0 378 aa16.83■□□□□ 0.28
APOE-205ENST00000485628 CERS4Q9HA82 394 aa16.83■□□□□ 0.28
APOE-205ENST00000485628 HSFX1Q9UBD0 423 aa16.83■□□□□ 0.28
APOE-205ENST00000485628 GTF3C4Q9UKN8 822 aa16.83■□□□□ 0.28
APOE-205ENST00000485628 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.83■□□□□ 0.28
APOE-205ENST00000485628 MTCL1Q9Y4B5 1905 aaKnown RBP16.83■□□□□ 0.28
APOE-205ENST00000485628 BZW2Q9Y6E2 419 aaKnown RBP16.83■□□□□ 0.28
APOE-205ENST00000485628 SSU72P8A0A1W2PR75 194 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 WDR27A2RRH5 827 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 HIDE1A8MVS5 230 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 TEX28O15482 410 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 CFHP08603 1231 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 OR4Q2P0C623 313 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 CCDC172P0C7W6 258 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 RPL17P18621 184 aaKnown RBP16.82■□□□□ 0.28
APOE-205ENST00000485628 BRD2P25440 801 aaKnown RBP16.82■□□□□ 0.28
APOE-205ENST00000485628 GNA15P30679 374 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 RPL34P49207 117 aaKnown RBP16.82■□□□□ 0.28
APOE-205ENST00000485628 PSMC1P62191 440 aaKnown RBP16.82■□□□□ 0.28
APOE-205ENST00000485628 CDR2Q01850 454 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 ROR1Q01973 937 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 CREMQ03060 361 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 CCDC173Q0VFZ6 552 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 SMC1AQ14683 1233 aaKnown RBP16.82■□□□□ 0.28
APOE-205ENST00000485628 STILQ15468 1287 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 MAPRE1Q15691 268 aaKnown RBP16.82■□□□□ 0.28
APOE-205ENST00000485628 ASIC2Q16515 512 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 SGO2Q562F6 1265 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 KIAA1841Q6NSI8 718 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 TMC7Q7Z402 723 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 DCP1BQ8IZD4 617 aaKnown RBP16.82■□□□□ 0.28
APOE-205ENST00000485628 WDTC1Q8N5D0 677 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 ZNF461Q8TAF7 563 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 ARNTL2Q8WYA1 636 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 CYFIP2Q96F07 1278 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms